PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM70153.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | LBD | ||||||||
Protein Properties | Length: 224aa MW: 24168.6 Da PI: 6.0859 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 132.3 | 2e-41 | 54 | 153 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+C ++Cvlapyfp ++p kf ++h++FGa+n++kll++lpe++r da+ s+vyeA+ar+rdPvyG+ g+i++lq+q+++l+aela++++ OWM70153.1 54 PCAACKILRRRCIDKCVLAPYFPPTDPYKFTIAHRVFGAANIIKLLQELPESQRADAVISMVYEANARLRDPVYGCSGTISRLQKQISELQAELAKMQA 152 7**********************************************************************************************9987 PP DUF260 100 e 100 e OWM70153.1 153 E 153 5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MVIVNAENIP SAPIHPPPPP ASSPPPTSAP TALPLSTSPP ASNNSSAVPV VISPCAACKI 60 LRRRCIDKCV LAPYFPPTDP YKFTIAHRVF GAANIIKLLQ ELPESQRADA VISMVYEANA 120 RLRDPVYGCS GTISRLQKQI SELQAELAKM QAESVNIQCQ NSHLLALLCM EMAGTQQAGD 180 PTSNCNNVTM HQQQQPQQQQ YMIDTSGFLD DSSLSSGWET LWGA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28500.1 | 3e-62 | LBD family protein |