PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM69921.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family LBD
Protein Properties Length: 173aa    MW: 19100.8 Da    PI: 7.0825
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM69921.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260144.62.9e-4561051100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 
                 +Ca+Ck+lrr+C+kdC++apyfp+++p++fa+vhk+FGasnv+k+l++lp ++r da++slvyeA+ar+rdPvyG+vg i+ lq+q++ql+ +la++++
  OWM69921.1   6 PCASCKLLRRRCTKDCIFAPYFPSDDPHRFAIVHKVFGASNVSKMLQELPVHQRVDAVNSLVYEANARVRDPVYGCVGAISYLQNQVAQLQMQLAVAQA 104
                 7***********************************************************************************************998 PP

      DUF260 100 e 100
                 e
  OWM69921.1 105 E 105
                 7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MGGNSPCASC KLLRRRCTKD CIFAPYFPSD DPHRFAIVHK VFGASNVSKM LQELPVHQRV  60
DAVNSLVYEA NARVRDPVYG CVGAISYLQN QVAQLQMQLA VAQAEILCIQ VQQEPVIMPT  120
SSQLAATIDG TDEKSAFLLH NNLPAQYLNF ASSSNVTHES LKRESFFGHD MVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30130.13e-63LBD family protein