PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM69914.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | ERF | ||||||||
Protein Properties | Length: 258aa MW: 28477.4 Da PI: 7.3444 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.5 | 7.7e-19 | 70 | 120 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr++ +g+WvAeIr+p + r r +lg+f ta eAa a+++a+++++g OWM69914.1 70 CRYRGVRQRT-WGKWVAEIREP---N-RgSRLWLGTFPTATEAAVAYDQAARAMYG 120 78*****999.**********8...3.35************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MASQQYGPVR KRRTRSRHDG SVAETLAKWK QYNEQLDSQK DVYKPVRKVP AKGSKKGCMK 60 GKGGPENSTC RYRGVRQRTW GKWVAEIREP NRGSRLWLGT FPTATEAAVA YDQAARAMYG 120 PLARLNFPSA TATTGSSLES SSSATATASS RLNFPGAPVM TGSSLEESSS ATATASSVET 180 PNESTSSYGS ETTAMQRTDT GGFHIKEEAK SELQEPPNQQ NPWDVNQNWD FDWLNGCIVD 240 EFFELDELLQ TLENDPQF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05410.2 | 8e-48 | ERF family protein |