PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM69866.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family WRKY
Protein Properties Length: 278aa    MW: 31415 Da    PI: 5.9889
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM69866.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY77.91.2e-24116175359
                 -SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 D y+WrKYGqK++ +++fpr Y+rCt++   gC+++k+v+r ++++++ +itY g H+++
  OWM69866.1 116 DDYAWRKYGQKDILNAKFPRCYFRCTHKpdqGCRATKQVQRMEDNQQMYQITYIGVHTCR 175
                 99*************************9999***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MAALIWPERL PQRVISELVN GREMAVQLQV LLRKDSRNHG SASAQEIAGK IMRSFTESIH  60
LLSSVESGEV CDDGGSEDSD ASKKRSELSG SKDGRGCYKR RKGSQTRTEI SATTGDDYAW  120
RKYGQKDILN AKFPRCYFRC THKPDQGCRA TKQVQRMEDN QQMYQITYIG VHTCRKTSRL  180
SPQIITDTDP WELSDCSKNQ AENNKYRVPA TVKHEYYKEE DNPSDVTENS FTPLGLKFER  240
EPMAGPDHDF GSLDVDELMA SCVGLDASDF SFADWNCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
183102KKRSELSGSKDGRGCYKRRK
299126KRRKGSQTRTEISATTGDDYAWRKYGQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40750.12e-43WRKY family protein