PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM69809.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

CPP

Protein Properties

Length: 760aa MW: 82458.4 Da PI: 6.334

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM69809.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.9	3e-16	459	497	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+CnCkkskClk+YCeCfaag++C e C C+dC+Nk OWM69809.1 459 ACKRCNCKKSKCLKLYCECFAAGVYCIEPCACQDCFNKP 497 589**********************************96 PP
2	TCR	50.4	4.3e-16	544	582	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks+ClkkYCeC++ g+ Cs +C+Ce+CkN OWM69809.1 544 RHKRGCNCKKSSCLKKYCECYQGGVGCSINCRCEGCKNA 582 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 760 aa Download sequence
MEMDTPERTQ IASSSTPISK FEDSPVFNYI NNLSPIKPVK STHITQTFSS LTFASLPSIF 60 TSPHVSSHKE SRFLRRHQSL DSSKLKSPGN AEKASTNEGA EAELRENFDA GISIASASAE 120 QLSEHTEFAI ELPRTLKYDC GSPDCGPTEE AGIQGADSIN QLEGEADPGN KQTDPGCDWE 180 SLVSETADLL IFSSPNDAEA FRGIFHKSPG LGTGIGASLS STLLQSNMTD VQKMQLLFQI 240 APGEHPEMGD ALENIEMKHT QEDLGSDDLE SMGIYPSDGC ENEAAPHGPF ADTKPVSNLH 300 RGMRRRCLDF EMAGAHPHRS LPDSSSYSSS LSHSKDKMAS KNLQLASVNN KRGGESSRHV 360 LPGIGLHLNS LASAKDYKAI KRDTLSSETQ VSNIHGQELL PQPMNSTASD KEADESGNIP 420 TEDTSKALVL LSPEELNPSS PRKKRHVERR VEHSGEAEAC KRCNCKKSKC LKLYCECFAA 480 GVYCIEPCAC QDCFNKPIHE DTVLATRKQI ESRNPLAFAP KVIRGSDSIT ELGDDTMKTP 540 ASARHKRGCN CKKSSCLKKY CECYQGGVGC SINCRCEGCK NAFGTKDGSV LGGAECEPEE 600 EETEKFEKTG LDVIPLKTEH PRSEEQIPSA VLPSTPSGLS RPPVQMAFPP SKGKPPRSSF 660 LTTIGSSYIL NAAQKMGKTE FLLPPPPKFE KPPPQPNTED EMPEILRGST TPTASIKTAS 720 PNRKRVSPPH GEFGSSPSLR SGRRLILQSI PSFPSLTSQH

Sequence ? help Back to Top

Protein Sequence Length: 760 aa Download sequence

MEMDTPERTQ IASSSTPISK FEDSPVFNYI NNLSPIKPVK STHITQTFSS LTFASLPSIF  60
TSPHVSSHKE SRFLRRHQSL DSSKLKSPGN AEKASTNEGA EAELRENFDA GISIASASAE  120
QLSEHTEFAI ELPRTLKYDC GSPDCGPTEE AGIQGADSIN QLEGEADPGN KQTDPGCDWE  180
SLVSETADLL IFSSPNDAEA FRGIFHKSPG LGTGIGASLS STLLQSNMTD VQKMQLLFQI  240
APGEHPEMGD ALENIEMKHT QEDLGSDDLE SMGIYPSDGC ENEAAPHGPF ADTKPVSNLH  300
RGMRRRCLDF EMAGAHPHRS LPDSSSYSSS LSHSKDKMAS KNLQLASVNN KRGGESSRHV  360
LPGIGLHLNS LASAKDYKAI KRDTLSSETQ VSNIHGQELL PQPMNSTASD KEADESGNIP  420
TEDTSKALVL LSPEELNPSS PRKKRHVERR VEHSGEAEAC KRCNCKKSKC LKLYCECFAA  480
GVYCIEPCAC QDCFNKPIHE DTVLATRKQI ESRNPLAFAP KVIRGSDSIT ELGDDTMKTP  540
ASARHKRGCN CKKSSCLKKY CECYQGGVGC SINCRCEGCK NAFGTKDGSV LGGAECEPEE  600
EETEKFEKTG LDVIPLKTEH PRSEEQIPSA VLPSTPSGLS RPPVQMAFPP SKGKPPRSSF  660
LTTIGSSYIL NAAQKMGKTE FLLPPPPKFE KPPPQPNTED EMPEILRGST TPTASIKTAS  720
PNRKRVSPPH GEFGSSPSLR SGRRLILQSI PSFPSLTSQH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	442	469	RKKRHVERRVEHSGEAEACKRCNCKKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-157	CPP family protein