PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM69742.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ZF-HD
Protein Properties Length: 403aa    MW: 44880.9 Da    PI: 7.554
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM69742.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer1071.1e-3366123359
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 
                  +v+Y+eClkNhAaslGgha+DGCgEfmps+ ++ ++++++kCaACgCHRnFHRre+e+
   OWM69742.1  66 AVTYRECLKNHAASLGGHALDGCGEFMPSPASNdADPTSIKCAACGCHRNFHRREPED 123
                  799**************************99998*********************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    
MDLTPTPTNT TSNTTNTAST KSPDPEPDTP TRIQPLGKPL SFTNGVLKRH HHHHHHAPPP  60
PPGSAAVTYR ECLKNHAASL GGHALDGCGE FMPSPASNDA DPTSIKCAAC GCHRNFHRRE  120
PEDAPPSSAP AAPATHVIEY QPHHRHHHPP PPPPPPXXXX XXXXXXXXXX XXXXXXXXXX  180
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX  240
XXXXXXXXXL LALSTAAAPE NSHPPPSSAA AMVSPIARKR FRTKFTQAQK ERMFEFAERV  300
GWKIQKRDED IIQEFCHEIG VERSVLKVWM HNNKNTLGKR STSSDHNLNI NTAATPTDTT  360
NNDNNINSTE NYDIPAGSQL GKYNVRITDK PADKLPDADD ANS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15210.14e-32ZF-HD family protein