PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM69712.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

ARF

Protein Properties

Length: 690aa MW: 75777.9 Da PI: 8.2998

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM69712.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	77.2	1.8e-24	125	226	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+lt+sd+++ g +++p+ +ae++ ++ + t+ +d +g++W++++iyr++++r++lt+GW+ Fv+ ++L +gD++vF+ + +++ l OWM69712.1 125 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--TILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFM--RAENGDL 219 89**************************996555555..89*******************************************..4488999 PP EEEEE-S CS B3 93 vvkvfrk 99 +v+++r+ OWM69712.1 220 CVGIRRA 226 **997 PP
2	Auxin_resp	110.5	1.7e-36	292	375	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+++++FevvY+Prast+eF+vk v++a++++++ GmRfkmafetedss++++ +Gt+++ + +dp++Wp+S+Wr+L+ OWM69712.1 292 AAKLAASRQAFEVVYYPRASTPEFCVKSCLVKSAMQIRWCSGMRFKMAFETEDSSRISWfMGTISSAQVADPIHWPDSPWRLLQ 375 68999*****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 690 aa Download sequence
MITFMDSKEK LKDVERTLDS QLWHACAGGM VQMPPVNSKV FYFPQGHAEH ASGPVDFRSF 60 PRLPPYIPCR VSSIKFMADP ETDEVYSKIR LIPLTGAEGP DFEDDRLGGG GLSGPDGTQE 120 KPASFAKTLT QSDANNGGGF SVPRYCAETI FPRLDYSADP PVQTILAKDV HGETWKFRHI 180 YRGTPRRHLL TTGWSTFVNH KKLVAGDSIV FMRAENGDLC VGIRRAKRGI GGGPESSTGW 240 NSCSVTPYGG FSAFLRDEET KLMRNGNGSN GVGSNGGSNG KGKVTIEAVV EAAKLAASRQ 300 AFEVVYYPRA STPEFCVKSC LVKSAMQIRW CSGMRFKMAF ETEDSSRISW FMGTISSAQV 360 ADPIHWPDSP WRLLQVTWDE PDLLQNVKRV SPWLVELVSN MPAIHLSPFS PPRKKLRLPQ 420 YPDFPLEGGQ FPLPPMFSGN ILGRPGGSPF GCPPDTSHPA GMQGARHAHH YALSLPDLHL 480 NRPQHVNPGP FMSSLSHFLT PNRTSNGPLI SKPSTIDPGS CFLTMKTSGK ARKKPEDSKT 540 PQLVLFGQPI LTEQQISLSC SGNTVSSEGT VDKIGNASDG TSHRSLQLYR ENHRKTPEPA 600 VEIGHCKVFM ESEDVGRTLD LSLLGSYDEL YKKLAEMFGV ENSQTLNHVK YRDSTGAVKH 660 VGEEPFGEFM KTARRLTILT DSSSDNKVGI

Sequence ? help Back to Top

Protein Sequence Length: 690 aa Download sequence

MITFMDSKEK LKDVERTLDS QLWHACAGGM VQMPPVNSKV FYFPQGHAEH ASGPVDFRSF  60
PRLPPYIPCR VSSIKFMADP ETDEVYSKIR LIPLTGAEGP DFEDDRLGGG GLSGPDGTQE  120
KPASFAKTLT QSDANNGGGF SVPRYCAETI FPRLDYSADP PVQTILAKDV HGETWKFRHI  180
YRGTPRRHLL TTGWSTFVNH KKLVAGDSIV FMRAENGDLC VGIRRAKRGI GGGPESSTGW  240
NSCSVTPYGG FSAFLRDEET KLMRNGNGSN GVGSNGGSNG KGKVTIEAVV EAAKLAASRQ  300
AFEVVYYPRA STPEFCVKSC LVKSAMQIRW CSGMRFKMAF ETEDSSRISW FMGTISSAQV  360
ADPIHWPDSP WRLLQVTWDE PDLLQNVKRV SPWLVELVSN MPAIHLSPFS PPRKKLRLPQ  420
YPDFPLEGGQ FPLPPMFSGN ILGRPGGSPF GCPPDTSHPA GMQGARHAHH YALSLPDLHL  480
NRPQHVNPGP FMSSLSHFLT PNRTSNGPLI SKPSTIDPGS CFLTMKTSGK ARKKPEDSKT  540
PQLVLFGQPI LTEQQISLSC SGNTVSSEGT VDKIGNASDG TSHRSLQLYR ENHRKTPEPA  600
VEIGHCKVFM ESEDVGRTLD LSLLGSYDEL YKKLAEMFGV ENSQTLNHVK YRDSTGAVKH  660
VGEEPFGEFM KTARRLTILT DSSSDNKVGI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein