PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OWM69689.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
|
||||||||
Family | E2F/DP | ||||||||
Protein Properties | Length: 373aa MW: 40411.3 Da PI: 6.6106 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 86.3 | 2.4e-27 | 114 | 195 | 3 | 71 |
E2F_TDP 3 eksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71 +++Lr++++k ++ek+e+ g++t+neva+eLv+e d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg OWM69689.1 114 GRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEfaeptnstespdqqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 195 689*******...*****999*******************************************************.*******98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 373 aa Download sequence |
MVLSGGGGEG STVSHDDADK NLVTAMSRVG GGGGGVTRSL GPTFSGQSVS TSGSIGSPSS 60 RSELAQVATT PPSDSTFLRL NHLDIRGDDA GSPGDVGSKK KKRAQRAAAG DKGGRGLRQF 120 SMKVCEKVES KGRTTYNEVA DELVAEFAEP TNSTESPDQQ QYDEKNIRRR VYDALNVLMA 180 MDIISKDKKE IQWKGLPHTS VNDIEELKTE RSGLRSRIEK KAAYLRELEE QNLIQRNEQL 240 YGSGNAPTGG VALPFILVQV IASLPIAVSK TRPHATVEVE ISEDMQLVHF DFNSTPFELH 300 DDNYILKAMK LSQRPDSDNA THDFSVNGVQ ECIPGTYPTQ IMAPNPSMLN TPVRCPTSPP 360 VPGILKARVK HEH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G03415.1 | 1e-118 | E2F/DP family protein |