PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM69593.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 280aa    MW: 30582.8 Da    PI: 10.948
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM69593.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.32.5e-20138187255
         AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr ++ +grW AeIrd       r r++lg+f+taeeAa+a++aa+++l+g
  OWM69593.1 138 NYRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTAEEAARAYDAAARRLRG 187
                 59*******.**********32....25*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MNGQALLPVP FHASPIQHPQ PPLEMFRFID ETPLLHVPLS LTKLSFVPNL QIGQPALSYS  60
PAPEAIKSEA DAAPPLDGIA AVVGEHVLFG KKDSEQADES HLPSISRCLG PMRPQKRQVS  120
EERRRTAAVE GNVSVQKNYR GVRKRPWGRW SAEIRDRIGR CRHWLGTFDT AEEAARAYDA  180
AARRLRGSKA RTNFEIPPIV PLPALSSPPA LPGSRRRREA AGRGRKCSVV TSVEHLFSGS  240
PSAHGNGSGN KAKITNGSNS ISNGLELDLK LEVGVRRSKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.12e-26ERF family protein