PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM69493.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WRKY

Protein Properties

Length: 1283aa MW: 142242 Da PI: 6.0944

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM69493.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	41.5	2.7e-13	161	203	17	59
T-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 17 gsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 g + +sYYrCt+++C+v+k vers+edp++v++tY+g H h+ OWM69493.1 161 GYRWRKSYYRCTYSNCMVRKSVERSSEDPTYVITTYKGVHCHP 203 555668************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 1283 aa Download sequence
MDGDKEPLQQ QPPGDPLAPA EFSSSWSGSV CLSDKDLDSS TVRAFRRRRL YEQSQSQSVS 60 GEIGPGGADS AGIFAELAST ITEVEGARGG VSAAALEEST SSPPSVSSDC SDDLADVSTV 120 SSGNLLAETP NNKVQKEGQK RIREPRCMFM TKSYGDVLDD GYRWRKSYYR CTYSNCMVRK 180 SVERSSEDPT YVITTYKGVH CHPSVGFLPG GRRVFTPNKN ATAFGPQQAS PLFPLLDNLP 240 EVLDLNTSPI EVNSPPHPSS LLPRLALTSD NHQLSPHSSG EPQSPQQLRR ATPPDLPTNV 300 GLLSDTVPSG MRHSEEDIKD LIAEEASSVL GRKNFHATEH SGGINDKVEE IVNLLQVEVN 360 DIRMLAIHGV GGVGKTTLAK IIFDQISKCF EGSSFLADIQ ETVGQRDDGF QVLQTKVISD 420 ILKRDCEKIA SIDEGIAIIG EMCSDIRVLI VLDNVGPGFQ LEELIGKLDS FGPGSRIIII 480 TRCKDGLPRM ANTYEVKNMP YWEAFQLFMK HAFGGHSYPS DEHCQFAKDI VTTVGGLPLI 540 IEVIGSFLSH KPKKVWEDTL RQLKESKEVH EKLMICYHAL NRQQKQIFID IACFLNGEDC 600 RVASYVWHDG ASSPHEVIES LCHLSLVKID DNYVLCMHDE LKELGRQLVF KDGYGKSRMT 660 SKLWISGRDF GMFVRMKEIE RVAAIRLISD NQSTYQDTEF RKMPGLRFLY LEHANITGDF 720 HDVFPNLKWL HWEGCPRIFK ATNFLLKNLV ILNLSRSKIT YNWEGWTHIK MASKLKVLNL 780 TGCDNLIVTP DFSGYPSLEK LIFERCCRLV KIDPSISHLE KLSSLNLKFC KELHTLPKEL 840 GFLKDLKELL IDGTSLRDIP TSIGHIKMLQ TLSASDCLSL INIPSSVGCL KSLLELSLDN 900 SKVTELPSSI DELVQLRKLS LRNCRLLGEL PSAIGGFRES LHELDVSGTG ISELPNSIGK 960 LGRLRVLKME SSFIREIPST IGGLTNLEQL HGSHCRSLGG DIPDSIGQLK SLKILRLGYT 1020 CITGLPSSMC DLPDLQILDL LCCDTLEMLP TLPLSLTSLR FSCKGIKKIS HLVGLHGLKE 1080 LVLADSGFEE LLDQTIGSME TAAPSEKIQL LQNKFEMEQL GHFDLPELKV LDMCVPQINS 1140 ICFDDGVAFH SLRKLVLSCV NLKILQFLPP MLVSLSMQHC WSLEILNVTG LKALSELQLQ 1200 DSAICEIYGL DSLGALQILG ISNCGMESLW GLDKLTSLQS LTLSCCDNLL GLPPLIKLHQ 1260 LRVRKIQSCK MFHDIDDPKE LIP

Sequence ? help Back to Top

Protein Sequence Length: 1283 aa Download sequence

MDGDKEPLQQ QPPGDPLAPA EFSSSWSGSV CLSDKDLDSS TVRAFRRRRL YEQSQSQSVS  60
GEIGPGGADS AGIFAELAST ITEVEGARGG VSAAALEEST SSPPSVSSDC SDDLADVSTV  120
SSGNLLAETP NNKVQKEGQK RIREPRCMFM TKSYGDVLDD GYRWRKSYYR CTYSNCMVRK  180
SVERSSEDPT YVITTYKGVH CHPSVGFLPG GRRVFTPNKN ATAFGPQQAS PLFPLLDNLP  240
EVLDLNTSPI EVNSPPHPSS LLPRLALTSD NHQLSPHSSG EPQSPQQLRR ATPPDLPTNV  300
GLLSDTVPSG MRHSEEDIKD LIAEEASSVL GRKNFHATEH SGGINDKVEE IVNLLQVEVN  360
DIRMLAIHGV GGVGKTTLAK IIFDQISKCF EGSSFLADIQ ETVGQRDDGF QVLQTKVISD  420
ILKRDCEKIA SIDEGIAIIG EMCSDIRVLI VLDNVGPGFQ LEELIGKLDS FGPGSRIIII  480
TRCKDGLPRM ANTYEVKNMP YWEAFQLFMK HAFGGHSYPS DEHCQFAKDI VTTVGGLPLI  540
IEVIGSFLSH KPKKVWEDTL RQLKESKEVH EKLMICYHAL NRQQKQIFID IACFLNGEDC  600
RVASYVWHDG ASSPHEVIES LCHLSLVKID DNYVLCMHDE LKELGRQLVF KDGYGKSRMT  660
SKLWISGRDF GMFVRMKEIE RVAAIRLISD NQSTYQDTEF RKMPGLRFLY LEHANITGDF  720
HDVFPNLKWL HWEGCPRIFK ATNFLLKNLV ILNLSRSKIT YNWEGWTHIK MASKLKVLNL  780
TGCDNLIVTP DFSGYPSLEK LIFERCCRLV KIDPSISHLE KLSSLNLKFC KELHTLPKEL  840
GFLKDLKELL IDGTSLRDIP TSIGHIKMLQ TLSASDCLSL INIPSSVGCL KSLLELSLDN  900
SKVTELPSSI DELVQLRKLS LRNCRLLGEL PSAIGGFRES LHELDVSGTG ISELPNSIGK  960
LGRLRVLKME SSFIREIPST IGGLTNLEQL HGSHCRSLGG DIPDSIGQLK SLKILRLGYT  1020
CITGLPSSMC DLPDLQILDL LCCDTLEMLP TLPLSLTSLR FSCKGIKKIS HLVGLHGLKE  1080
LVLADSGFEE LLDQTIGSME TAAPSEKIQL LQNKFEMEQL GHFDLPELKV LDMCVPQINS  1140
ICFDDGVAFH SLRKLVLSCV NLKILQFLPP MLVSLSMQHC WSLEILNVTG LKALSELQLQ  1200
DSAICEIYGL DSLGALQILG ISNCGMESLW GLDKLTSLQS LTLSCCDNLL GLPPLIKLHQ  1260
LRVRKIQSCK MFHDIDDPKE LIP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	45	50	FRRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12020.2	5e-49	WRKY family protein