PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM69237.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | C3H | ||||||||
Protein Properties | Length: 295aa MW: 31238.1 Da PI: 9.4711 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 23 | 1.4e-07 | 106 | 129 | 4 | 27 |
---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHgp 27 + C+ + Ck+Gd+C+FaHg+ OWM69237.1 106 RMCNKYNTAEGCKFGDKCHFAHGE 129 78********************96 PP | |||||||
2 | zf-CCCH | 34.9 | 2.6e-11 | 262 | 286 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 +kt+lC++f + GtC +G+rC+FaHg OWM69237.1 262 FKTKLCDNFTK-GTCTFGERCHFAHG 286 69*********.*************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 295 aa Download sequence |
MEYSGGRKRW RSDGPLNGNG GAKKYKQEGE SFPSGLGSKS KPCTKFFSTS GCPFGEGCHF 60 LHYVPGGIKA VSQMLGNPNL LPPTPRNSAP PASFPDAPSP SAVKGRMCNK YNTAEGCKFG 120 DKCHFAHGEW ELGKPSAPSY DDPRAMSRGG MGRYEPPPPA MAAGFGASAT AKISINASLA 180 GAIIGKNGVN SKQICRLTGA KLSIRDHESD PSLRNIELEG SFEQIQQASA MVRELIGNAG 240 SSSGPAGRNN AMGHHHHGRS NFKTKLCDNF TKGTCTFGER CHFAHGADEL HKSGP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06770.1 | 6e-55 | C3H family protein |