PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM69186.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 700aa MW: 77524 Da PI: 5.8998

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM69186.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.9	4.2e-14	484	530	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +ErrRR+++N++f Lr+l+P +K++Ka+iL ++eY+k+L+ OWM69186.1 484 NHVLAERRRREKLNERFIILRSLVPFV-----TKMDKASILGDTIEYVKQLR 530 7999********************8.....8***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 700 aa Download sequence
MAAASSSNCL QSTLQAAVQS VKWTYSLFWQ ICPQQGILIW GDGYYNGPIK TRKTVQPMEV 60 SAEEASLQRS QQLRELYDSL SACETNQPPA RRPSAALSPE DLTETEWFYL MCVSFSFPPG 120 VGLPGKAYSR RQHVWLTGAN EVDSKTFSRA ILAKTVVCIP LLDGVVELGT TEKVQEDVGF 180 TTHVKSFFAD HQPPHPPKPA LSEHSTSNPA TSSGHPRFNY SPPGSTIMYT AAAVDPPVAA 240 HQADADDDEE DEEEEDEEDH AESDSEAETG RAASHQQVVG QHNPQAGLVG AAEQSELMQL 300 EMSEDIRLGS PDDGSNNLDS DFHMLTVNKA VGNIINPADH QRRVDSFRAE SSRRWQMPEG 360 PPRSSGLNVG PPPHLHELSQ EDTHYSQTIS TILQGQPNRW AEMSSVTGYV LYSAQSAFSK 420 WMARADHLLH VPTEGTSQWL LKYILFSVPF LHNKYKDENS PKSRDGESSA RFRKGTPQDE 480 LSANHVLAER RRREKLNERF IILRSLVPFV TKMDKASILG DTIEYVKQLR MRIQDLETKI 540 RQMETDLRSR LGDPARLSSS KEQRSSSAGA VDRAACSAPP GTEKRKMRIV EGSGTVVKPK 600 AVESPPPPPT PTSMETSVQV SIIESNGLIE LQCPHKEGLL LDVMQMLREL RIEITAVQSS 660 LTNGFFMAEL KAKVKENVNG KKASIVEVKR AIQQLIPHAD

Sequence ? help Back to Top

Protein Sequence Length: 700 aa Download sequence

MAAASSSNCL QSTLQAAVQS VKWTYSLFWQ ICPQQGILIW GDGYYNGPIK TRKTVQPMEV  60
SAEEASLQRS QQLRELYDSL SACETNQPPA RRPSAALSPE DLTETEWFYL MCVSFSFPPG  120
VGLPGKAYSR RQHVWLTGAN EVDSKTFSRA ILAKTVVCIP LLDGVVELGT TEKVQEDVGF  180
TTHVKSFFAD HQPPHPPKPA LSEHSTSNPA TSSGHPRFNY SPPGSTIMYT AAAVDPPVAA  240
HQADADDDEE DEEEEDEEDH AESDSEAETG RAASHQQVVG QHNPQAGLVG AAEQSELMQL  300
EMSEDIRLGS PDDGSNNLDS DFHMLTVNKA VGNIINPADH QRRVDSFRAE SSRRWQMPEG  360
PPRSSGLNVG PPPHLHELSQ EDTHYSQTIS TILQGQPNRW AEMSSVTGYV LYSAQSAFSK  420
WMARADHLLH VPTEGTSQWL LKYILFSVPF LHNKYKDENS PKSRDGESSA RFRKGTPQDE  480
LSANHVLAER RRREKLNERF IILRSLVPFV TKMDKASILG DTIEYVKQLR MRIQDLETKI  540
RQMETDLRSR LGDPARLSSS KEQRSSSAGA VDRAACSAPP GTEKRKMRIV EGSGTVVKPK  600
AVESPPPPPT PTSMETSVQV SIIESNGLIE LQCPHKEGLL LDVMQMLREL RIEITAVQSS  660
LTNGFFMAEL KAKVKENVNG KKASIVEVKR AIQQLIPHAD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	489	494	ERRRRE
2	490	495	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	6e-92	bHLH family protein