PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM69142.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

HB-other

Protein Properties

Length: 512aa MW: 57227.9 Da PI: 7.2412

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM69142.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61.9	9.8e-20	67	121	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 k+ t++qle+L+e ++ n+yp++e + +LA++lgLte+qV++WF+NrR ++k+ OWM69142.1 67 KKKVKTPSQLEALKEIYRVNKYPTEELKLRLAEQLGLTEKQVTNWFCNRRVRDKR 121 566789***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MGMPYSSTPF PSKLKNKPFP PASLPVSSLL LLLLLLHGIL LSLLCLIEET GEVQHGESIA 60 LHKESNKKKV KTPSQLEALK EIYRVNKYPT EELKLRLAEQ LGLTEKQVTN WFCNRRVRDK 120 RLPSKDEVHG DGRQDHSSGV IVQDRGSGFG QDSSGSTKQG NRRPPVDLRD VESRSLYGQD 180 SPSADLTYEL RSHYPGNING VQDTSSESSS ALQERYCSRS MDKYGVQGTQ FMISQGIRVP 240 PGSKTVKDMG INYKPSGYLK VRVEIENAAI TTVKRQLGRY YREDGPPLGV EFQPLPPGAF 300 ESAGRQSALE SYYDEDPALS HSPNIHLVHH PSHMNARPEY PDWKAKKSYE EALNSSPVDS 360 FDDYEDQPRH RSKQKQKCSF SDRSGYLAGT NSSLDMQDHI VGDDFVNGGG RNHKRNYNHN 420 DEVIRSDHLW SSVAGEPQLY ECENADPMVV QCSKRSREKL PPNPVIRGSD PTNVEGGGPS 480 RRISKVKMVR YTAEMQSCLS DDETACTNSS LD

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MGMPYSSTPF PSKLKNKPFP PASLPVSSLL LLLLLLHGIL LSLLCLIEET GEVQHGESIA  60
LHKESNKKKV KTPSQLEALK EIYRVNKYPT EELKLRLAEQ LGLTEKQVTN WFCNRRVRDK  120
RLPSKDEVHG DGRQDHSSGV IVQDRGSGFG QDSSGSTKQG NRRPPVDLRD VESRSLYGQD  180
SPSADLTYEL RSHYPGNING VQDTSSESSS ALQERYCSRS MDKYGVQGTQ FMISQGIRVP  240
PGSKTVKDMG INYKPSGYLK VRVEIENAAI TTVKRQLGRY YREDGPPLGV EFQPLPPGAF  300
ESAGRQSALE SYYDEDPALS HSPNIHLVHH PSHMNARPEY PDWKAKKSYE EALNSSPVDS  360
FDDYEDQPRH RSKQKQKCSF SDRSGYLAGT NSSLDMQDHI VGDDFVNGGG RNHKRNYNHN  420
DEVIRSDHLW SSVAGEPQLY ECENADPMVV QCSKRSREKL PPNPVIRGSD PTNVEGGGPS  480
RRISKVKMVR YTAEMQSCLS DDETACTNSS LD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	4e-58	HB-other family protein