PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM69030.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

E2F/DP

Protein Properties

Length: 463aa MW: 51119.2 Da PI: 5.0848

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM69030.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	85.6	3.8e-27	141	206	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+g+++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg OWM69030.1 141 RYDSSLGLLTKKFINLIKHAEDGVLDLNKAAETL---QV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 206 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MSDSARTPPP PPPLQTARAT AMHPPPATHL PFSSVRPPFV PAGDYHRFAA ELGRVPPDRE 60 ADAFAGRSPQ VKRKSDELDC KVESTVYAEA LNSPFQTPVS GKVAKTGKNS RAAKSNRGPQ 120 TPVSNAGSPS GGNLTPAGPC RYDSSLGLLT KKFINLIKHA EDGVLDLNKA AETLQVQKRR 180 IYDITNVLEG IGLIEKKLKN RIQWKGLDAS RPGEIDESFG SLQAEVDALS IEEHRLDQRV 240 REMQERLRDL SEDGDNQRWL FVTEDDIKGL PCFQNETLIA IKAPHGTTLE VPDPDEDVDY 300 RQRRYRIVLR STMGPIDVYL VSQFEERFEE IGAEPPSSLP SRSTFHENPP SSSAKEDGNR 360 KEIQMQGHEA HRPSPDFNPM PDFVGGIMKI VPSDVHSEAD YWLLSDAEVS ITDMWRTELI 420 AGVQWNGLSE DYSMTNASIT LPETTPTSMP EVPTSTALGS SCK

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MSDSARTPPP PPPLQTARAT AMHPPPATHL PFSSVRPPFV PAGDYHRFAA ELGRVPPDRE  60
ADAFAGRSPQ VKRKSDELDC KVESTVYAEA LNSPFQTPVS GKVAKTGKNS RAAKSNRGPQ  120
TPVSNAGSPS GGNLTPAGPC RYDSSLGLLT KKFINLIKHA EDGVLDLNKA AETLQVQKRR  180
IYDITNVLEG IGLIEKKLKN RIQWKGLDAS RPGEIDESFG SLQAEVDALS IEEHRLDQRV  240
REMQERLRDL SEDGDNQRWL FVTEDDIKGL PCFQNETLIA IKAPHGTTLE VPDPDEDVDY  300
RQRRYRIVLR STMGPIDVYL VSQFEERFEE IGAEPPSSLP SRSTFHENPP SSSAKEDGNR  360
KEIQMQGHEA HRPSPDFNPM PDFVGGIMKI VPSDVHSEAD YWLLSDAEVS ITDMWRTELI  420
AGVQWNGLSE DYSMTNASIT LPETTPTSMP EVPTSTALGS SCK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.2	1e-146	E2F/DP family protein