PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM68867.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | LBD | ||||||||
Protein Properties | Length: 195aa MW: 21249.2 Da PI: 7.3108 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 138.4 | 2.5e-43 | 30 | 129 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC+++Cvlapyfp ++p kf ++h++FGasn++k+l++lpe++r da+ss+vyeA ar+rdPvyG++g i +lq+q+++l+aela++k+ OWM68867.1 30 PCAACKILRRKCSEKCVLAPYFPPTDPVKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGAICQLQKQINELQAELAKAKA 128 7***********************************************************************************************998 PP DUF260 100 e 100 e OWM68867.1 129 E 129 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MGCPGRADSE LPRSPSSPRS PAPASMIMSP CAACKILRRK CSEKCVLAPY FPPTDPVKFT 60 IAHRVFGASN IIKFLQELPE SQRADAVSSM VYEASARIRD PVYGCAGAIC QLQKQINELQ 120 AELAKAKAEM SSMKTQHAHL MALICTVEMD RPSPSSSTEQ SDDSNISRAV NETNPSYILD 180 HDNYLGSSWP GSLWA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07900.1 | 3e-57 | LBD family protein |