PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM68795.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GRAS
Protein Properties Length: 767aa    MW: 86822.3 Da    PI: 5.9316
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM68795.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS369.25.6e-1133937641373
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL+ cA+avs++d + a+++L+++++++sp gd  qRla++f+++L+arl ++++++y+al++++ts    ++ l+a+++++  +P+ k++++ aN
  OWM68795.1 393 LRTLLVLCAQAVSTDDRRTAREYLKQIRQHSSPFGDGSQRLAHCFANGLEARLEGNGTQIYNALSSKRTS---AVDMLKAYQVYVSSCPFQKMANIFAN 488
                 5789*************************************************************99999...9************************* PP

        GRAS 100 qaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLr 195
                 ++Il+ + ++ +++HiiDf+i +G+QWpaL+  L++ p+gp +lRiTg++ p++g   +e+++etg+ Lak +e+++vpfe+n+ +a+++e++++e+L+
  OWM68795.1 489 HTILDLARKAiSTLHIIDFGILYGFQWPALIFRLSKLPGGPRKLRITGIELPQPGfrPAERVHETGRHLAKCCERFNVPFEYNA-IAQKWETIRMEDLK 586
                 *********999******************************************9*****************************.7************* PP

        GRAS 196 vkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgrei 294
                 ++++E ++Vn++++ ++llde+v+l+++rd+vLkl+++++P ++  +  + +++ + F++rf eal +ys+lfd+++a+l+re++ r + E+++lgre 
  OWM68795.1 587 LRNDELIVVNSMFRFKNLLDETVALNNPRDSVLKLIRRINPSLFLQAIVNGSYSVPFFVTRFREALFHYSSLFDAFDANLAREDQMRLMFEKQWLGRET 685
                 *************************************************************************************************** PP

        GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                 vnv+acegaer+er e++++W+ r ++aGF++vpl+ +++ ++++ l++ + + + ++e+  ++++gWk+r L++ S+W
  OWM68795.1 686 VNVIACEGAERVERPESYKQWQVRNMRAGFRQVPLDPFVMGKIRHKLKESYHEDFVLDEDGCWMLQGWKGRILYASSCW 764
                 ***************************************************999************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 767 aa     Download sequence    
MTTGSGSLRG FRFDDETLLP CSDQLGNFAN GHFIFSEPSP NSSFTGDHHQ LLVHHQEPGG  60
FSAPSSVLSA EADSLPFDDN DFSETVFSYI SQMLMEEDME EKPSEFHDPS ALEATEKSLF  120
EALAEKCPFS PSNFTRPPYS LDDSFNDNDS GNSTDYGGKT SSPSSFNSVE PQWIGDFGEN  180
YLSLLQSPIS ENFILQSTAN SGLQPADLLV SAPQVSNFYT QSDLALQFQR GVEEASKFLP  240
KGNQFFIDLE SSSFNLAPKE KPSTVLVKME KEEEQYSLPN GNKEKKNHER EETEFDEQRS  300
NKQSAVYEEE AAELSEMFDK ILIFPHGHRG GRPHCHERRE FLNNEVKEKQ KPDGQNNVSN  360
GGGKAVTKKL SSSSSKPSNN SSNNTTTKKA VDLRTLLVLC AQAVSTDDRR TAREYLKQIR  420
QHSSPFGDGS QRLAHCFANG LEARLEGNGT QIYNALSSKR TSAVDMLKAY QVYVSSCPFQ  480
KMANIFANHT ILDLARKAIS TLHIIDFGIL YGFQWPALIF RLSKLPGGPR KLRITGIELP  540
QPGFRPAERV HETGRHLAKC CERFNVPFEY NAIAQKWETI RMEDLKLRND ELIVVNSMFR  600
FKNLLDETVA LNNPRDSVLK LIRRINPSLF LQAIVNGSYS VPFFVTRFRE ALFHYSSLFD  660
AFDANLARED QMRLMFEKQW LGRETVNVIA CEGAERVERP ESYKQWQVRN MRAGFRQVPL  720
DPFVMGKIRH KLKESYHEDF VLDEDGCWML QGWKGRILYA SSCWVPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein