PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM68749.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MYB | ||||||||
Protein Properties | Length: 195aa MW: 22815.8 Da PI: 9.8395 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 40.1 | 8.4e-13 | 52 | 90 | 3 | 42 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcks 42 WT eEd +lv +vk++G + W+ Ia+++ gR +k c++ OWM68749.1 52 QWTHEEDRKLVSLVKEYGEKKWAQIAEKLA-GRRGKRCRH 90 7*****************************.********8 PP | |||||||
2 | Myb_DNA-binding | 42.9 | 1.2e-13 | 101 | 139 | 3 | 43 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksr 43 +W++eE+ lv+a+++ G+ W+ I ++++ gRt++ +k++ OWM68749.1 101 SWSEEEERMLVEAHEKVGNQ-WAEITKYIP-GRTENTIKNH 139 6*****************99.*********.*********9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MEGDHRVVEE GGVSLNGKLR RKPHHNQPLT AIDREEISCE ERQLESFDKG SQWTHEEDRK 60 LVSLVKEYGE KKWAQIAEKL AGRRGKRCRH NHLRPDIKKY SWSEEEERML VEAHEKVGNQ 120 WAEITKYIPG RTENTIKNHR NATKRSLQNS RQKNKAINSQ NILSPHPSVL EDYIRWKNCQ 180 APTPNPPPML SLRLC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G58850.1 | 1e-48 | MYB family protein |