PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM68728.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

G2-like

Protein Properties

Length: 366aa MW: 41400.3 Da PI: 8.4676

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM68728.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.3	3.1e-32	71	124	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH rFv+ave+LGG+e+AtPk +l+lm++kgL+++hvkSHLQ+YR+ OWM68728.1 71 PRLRWTPELHLRFVQAVERLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMYRS 124 8****************************************************7 PP
2	Myb_DNA-binding	56.4	6.6e-18	72	123	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e+++++v+av++lGg t+k++ + m+ kg++ ++ks++q+y+ OWM68728.1 72 RLRWTPELHLRFVQAVERLGGQeraTPKLVLQLMNiKGLSIAHVKSHLQMYR 123 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MEENGSCDDV DWKNDMESLP SDEKSEEFDG NRESNKTNSS ASSSNSMVEE SSDQKKPAST 60 GVRPYVRSKV PRLRWTPELH LRFVQAVERL GGQERATPKL VLQLMNIKGL SIAHVKSHLQ 120 MYRSKKMNDR GEVINTRPDL MDFPHNLWQQ SMFGSLNPRS STFSNRGCHN IINGQIRNWN 180 CGSYSYVTDD ALNIRKGAGF PSLTVEAILK NGASYAIDNY QSCFRQQEIS KRTEPFMQPS 240 PFVRAALVQA QTIMPSFATH TSPKSSYHEE LMISRRGGDS RADHQDYCYR SSMSGLNGNL 300 HCQEPDTMKR KAADEDDMDG GFDLRLSLST KPKARGKELA KKRALRENHE EDRMVLRLSC 360 SSASKE

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MEENGSCDDV DWKNDMESLP SDEKSEEFDG NRESNKTNSS ASSSNSMVEE SSDQKKPAST  60
GVRPYVRSKV PRLRWTPELH LRFVQAVERL GGQERATPKL VLQLMNIKGL SIAHVKSHLQ  120
MYRSKKMNDR GEVINTRPDL MDFPHNLWQQ SMFGSLNPRS STFSNRGCHN IINGQIRNWN  180
CGSYSYVTDD ALNIRKGAGF PSLTVEAILK NGASYAIDNY QSCFRQQEIS KRTEPFMQPS  240
PFVRAALVQA QTIMPSFATH TSPKSSYHEE LMISRRGGDS RADHQDYCYR SSMSGLNGNL  300
HCQEPDTMKR KAADEDDMDG GFDLRLSLST KPKARGKELA KKRALRENHE EDRMVLRLSC  360
SSASKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	1e-40	G2-like family protein