PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM68664.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family WRKY
Protein Properties Length: 351aa    MW: 39811.2 Da    PI: 4.968
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM68664.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.63e-29127187259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 dDgynWrKYGqK++ gs+fpr+YYrCt++   gC ++k++++s++dp+v+e++Y+g+H+++
  OWM68664.1 127 DDGYNWRKYGQKDILGSKFPRGYYRCTHRhvqGCLATKQIQKSDHDPNVFEVVYRGRHTCS 187
                 8***************************99999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MEAEQQVMMM GKWDPRTLMN ELAQGKELAQ QLKTHLAPPS STERRRFLTE RILGCYEKAL  60
SLLNCRDISG GSRDASESTV SFLQESPTSR VGDQFPRDVF KKRKTSTPRW TEEVRVVSGS  120
GLDGPPDDGY NWRKYGQKDI LGSKFPRGYY RCTHRHVQGC LATKQIQKSD HDPNVFEVVY  180
RGRHTCSRST HSVVQSQSRT SDGPRQEQDN GSRPRTFDQK LPNQSQPINF NFKSDLRLEP  240
EEVDARDEMF PSFSFTDSAI ESDQNIFATV LTDNNFLDSI TIETPEPDYL QPMSLCHLSS  300
LTSESDPHEI VSAPTSVTNS PIGDVIFPLE KIEFDPDLLL DDLQFSYEGS I
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
196104PRDVFKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.11e-40WRKY family protein