PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OWM68616.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
|
||||||||
Family | HD-ZIP | ||||||||
Protein Properties | Length: 257aa MW: 28645.9 Da PI: 6.1808 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.2 | 1.3e-18 | 40 | 94 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++++f++eq++ Le+ Fe++ ++ +++ + A++lgL+ rqV +WFqN+Ra++k OWM68616.1 40 SNKRRFSDEQIRSLETIFESETRLDPRKKLQVARELGLQPRQVAIWFQNKRARWK 94 56789*************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 120 | 1.2e-38 | 41 | 132 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +krr+s+eq+++LE+ Fe+e++L+p++K ++areLglqprqva+WFqn+RAR+k+kqlE+dy+ L++ y +l+++ e+L+ke+++L ++l++ OWM68616.1 41 NKRRFSDEQIRSLETIFESETRLDPRKKLQVARELGLQPRQVAIWFQNKRARWKSKQLEHDYAILRADYTQLASRLESLKKEKHALISQLEK 132 79*************************************************************************************99986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 257 aa Download sequence |
MLGDAPGELY YSPSGLAMEA FDYVNPSWRQ IKKGKGRGKS NKRRFSDEQI RSLETIFESE 60 TRLDPRKKLQ VARELGLQPR QVAIWFQNKR ARWKSKQLEH DYAILRADYT QLASRLESLK 120 KEKHALISQL EKLKDLADKG AAAASAVTDG DRSGVEDETK TEPPAAAAAA AAAAAAPALL 180 LSDGVSSIKA EWNLGILEEE DDHHHRHQDD SESLKMNMDV MDKGSSLSST RHGPSPSLNS 240 DDLLNDSSPT QWWDFWS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G46680.1 | 6e-42 | HD-ZIP family protein |