PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM68396.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 394aa    MW: 43924.3 Da    PI: 4.6812
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM68396.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.93e-19120169255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a++a +++++g
  OWM68396.1 120 QYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDAEARRIRG 169
                 69*******.**********954...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    
MCGGAIISDF IPTARSRRPT SDFRWPDLRK NKKSSGSGKP RHPRRSDVID LDDDIEADFQ  60
EFKGDSDFDE DFDFGDEVDV KPFAFFAAPK SRPSTGSVKP KSVEFNGQAE KSAKRKRKNQ  120
YRGIRQRPWG KWAAEIRDPR KGVRVWLGTF NTAEEAARAY DAEARRIRGK KAKVNFPEDA  180
PNSSSKRTAK SNPPKPMPKM NLDNVQPNMN QSFNGLLNSS DDDYYNSAGF LEEKPPVNQF  240
AYMDSFNSGG ADELKSFAPS ENAPLYFNSD QGSNSFDCSD FGWGENGSKT PDVSSILSAT  300
LEVDESQYEE SNPKKKLKPS SEEVVLDQES AAKTLSDELS AFDSQIKYFQ MPYLEGGWDA  360
PIETLFNGDT TQDGGNAVDL WTFDDLPSMV GGVF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14230.31e-75ERF family protein