PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM68032.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

DBB

Protein Properties

Length: 461aa MW: 51448 Da PI: 5.5971

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM68032.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	17.8	6.7e-06	2	42	3	37
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 e++C+ + + +C+ ++ llC +C ++ H+ H OWM68032.1 2 EKVCEFCMALRPAVYCQADSALLCLSCDSKVHSAnalsnrH 42 679****99*******************555666666 PP
2	zf-B_box	16.9	1.3e-05	46	81	4	37
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg..H 37 C+ + +++ C+d ++++C++C + H++ H OWM68032.1 46 LLCDSCRVRPASVRCKDHRMFMCQSCDRSLHSSsgH 81 57****99*******************76775 PP

Sequence ? help Back to Top
Protein Sequence Length: 461 aa Download sequence
MEKVCEFCMA LRPAVYCQAD SALLCLSCDS KVHSANALSN RHPRSLLCDS CRVRPASVRC 60 KDHRMFMCQS CDRSLHSSSG HASQQQHQKR VISSYIGCPS AKDFAAIWDL DLNELTDVSR 120 STLNVSSLQE FVDSRDASLD APMQYHWQQR RTSSVGSIMS CTTSACAGMP NANTNNQQSN 180 KISHNGQNQP QQQNQSSQFI LQQILDLKRL QLNEGNCFSP MMRRKEEKDV SSSLGKALRR 240 IDEATNENSQ HSRDLEAEFL QSVTPLEELR SEDFASPFSS TENYPCSNAG VSLLGDSFWQ 300 CRSPLQTSQF MSQNIQDLGV CEDLMCRDDF NSIPEVDMTF QNFEELFGGD QDPARGLLMR 360 DNDLSCSSLD RTISLDKSEN SQAHDASASS SIYSGSVAHV NSDTTLSKHR PQIQLSYSEL 420 SLSISQETEG RAFGSPDDSA ADLEIKENAV RRHRDKKKAR L

Sequence ? help Back to Top

Protein Sequence Length: 461 aa Download sequence

MEKVCEFCMA LRPAVYCQAD SALLCLSCDS KVHSANALSN RHPRSLLCDS CRVRPASVRC  60
KDHRMFMCQS CDRSLHSSSG HASQQQHQKR VISSYIGCPS AKDFAAIWDL DLNELTDVSR  120
STLNVSSLQE FVDSRDASLD APMQYHWQQR RTSSVGSIMS CTTSACAGMP NANTNNQQSN  180
KISHNGQNQP QQQNQSSQFI LQQILDLKRL QLNEGNCFSP MMRRKEEKDV SSSLGKALRR  240
IDEATNENSQ HSRDLEAEFL QSVTPLEELR SEDFASPFSS TENYPCSNAG VSLLGDSFWQ  300
CRSPLQTSQF MSQNIQDLGV CEDLMCRDDF NSIPEVDMTF QNFEELFGGD QDPARGLLMR  360
DNDLSCSSLD RTISLDKSEN SQAHDASASS SIYSGSVAHV NSDTTLSKHR PQIQLSYSEL  420
SLSISQETEG RAFGSPDDSA ADLEIKENAV RRHRDKKKAR L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G48250.1	3e-30	CO-like family protein