PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM67690.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GATA
Protein Properties Length: 356aa    MW: 38490.5 Da    PI: 4.4938
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM67690.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA50.52.7e-16207243135
        GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++Cg+++  Tp +Rrgp g++tLCnaCGl+++ kg+
  OWM67690.1 207 CQHCGVSEnaTPAMRRGPAGPRTLCNACGLMWANKGT 243
                 **********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MNPQPLPERA VEEHAREPAC VDDEDGEYGG GDDEMEEMEE TSGGPVNSVS NHSNNTGAAA  60
AAAGGGVVAA SRTSELTLSF EGEVYVFPAV TPEKVQAVLL LLGGCDVPII VPTVEAPYVQ  120
IDKSMADTPK RSNLSRRIAS LVRFREKRKE RCFDKKIRYT VRKEVAQRMH RKNGQFASLK  180
EGASSWDSAQ SCPQDGTLHA DTALRRCQHC GVSENATPAM RRGPAGPRTL CNACGLMWAN  240
KGTLRDLSKG GRNLPVDQIE PGTPIDIKPS ITEEQNFHSN LDEDGKSGEI HNVDSDRSVN  300
PSGNPGAEDF HEATEDMTHT LAMEMINSLA EDEDQGTLAE LADPSDTDID SPSNFN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1127132DTPKRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.21e-69GATA family protein