PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM67689.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GATA
Protein Properties Length: 308aa    MW: 32822.4 Da    PI: 6.9115
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM67689.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA47.72.1e-15219255135
        GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++Cg ++  Tp++Rrgp+g+++LCnaCGl+++ +g+
  OWM67689.1 219 CTHCGISSkcTPMMRRGPSGPRSLCNACGLFWANRGT 255
                 ******999************************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MYTPMNLPKQ QIVRRGPADD DDGDGSSSAP AGTADSLGHP HMAYEVHGLD DGAAAAAGMG  60
GVIESIPPDA VYATGSGSEM AIPDGEDSSQ LTLSFRGQVY VFDAVTPKKV HAVLLLLGGC  120
ELSSGVQGVE MAQDNHRGGL DFPTRCSQPQ RAASLNRFRQ KRKERCFDKK VRYSVRQEVA  180
LRMQRNKGQF TSSKKPDGAV SWGSGNDSGQ DDNPQETCCT HCGISSKCTP MMRRGPSGPR  240
SLCNACGLFW ANRGTLRDLS KRNQDSSLTP SEQGVNETNG SVCGTGKHSH GSIDPFSNGD  300
NQSLIAEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24470.23e-84GATA family protein