PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM67412.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

ARR-B

Protein Properties

Length: 495aa MW: 54811.6 Da PI: 5.9593

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM67412.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.2	1.6e-07	227	294	1	48
TSSS-HHHHHHHHHHHHHTTTT................-HHHHHHHHT....TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg................tWktIartmg....kgRtlkqcksrwqkyl 48 r WT+++++++v+a+ + ++ +k I ++ +g+t+ ++ s++qk++ OWM67412.1 227 RVHWTPDLQQKFVEAIDRIDKRknpgrrfrndeseeqaVPKEILDELRrmgvTGLTRQNISSHLQKHR 294 668***************************************9999999*************97 PP
2	G2-like	30.6	7.6e-10	262	295	25	55
G2-like 25 ekAtPktile...lmkvkgLtlehvkSHLQkYRl 55 e+A+Pk+il+ m+v gLt++++ SHLQk+R+ OWM67412.1 262 EQAVPKEILDelrRMGVTGLTRQNISSHLQKHRT 295 79****753337*****************8 PP
3	Response_reg	53.4	1.4e-18	26	138	1	107
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH.HHHHESEEEEESSCTTSEHHHHHHHHHHHT..TTSEEEEEE..STTT.HHHHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealell.kekdpDlillDiempgmdGlellkeireee..pklpiivvt..ahge.eedalealk 91 vl+v D+p+ e l++al++ ev++++ +++a ll ++k++D++l+ +m +mdG+++l +i++ e ++lp+i++ +++ + +++ ++ OWM67412.1 26 VLLVGDNPASVEPLKKALQEICKHEVTTCTVPKDAPSLLlEKKRFDIVLIEYRMGDMDGFQILDSIQSMEkaDDLPVIFLFsgGQDMdVDVLKRGVE 122 89***************7666699999999999888846666******************88888999*986222222367788999 PP TTESEEEESS--HHHH CS Response_reg 92 aGakdflsKpfdpeel 107 G+ dfl+Kp+ e l OWM67412.1 123 KGVCDFLTKPIRDETL 138 ***********99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MSSKESSLAK TLERSPAKFD ATGLRVLLVG DNPASVEPLK KALQEICKHE VTTCTVPKDA 60 PSLLLEKKRF DIVLIEYRMG DMDGFQILDS IQSMEKADDL PVIFLFSGGQ DMDVDVLKRG 120 VEKGVCDFLT KPIRDETLKL IWTHVFRSRL HRKEGVIVNN DAVSEVNRRD RLDSPIQSSS 180 GHDSAALGMS EGSSGMKRGR DHAEDQPDES NDSIGTASAA AITKKPRVHW TPDLQQKFVE 240 AIDRIDKRKN PGRRFRNDES EEQAVPKEIL DELRRMGVTG LTRQNISSHL QKHRTSKKKQ 300 GQLSELQNGP LITMNYSSPG QYSSLSIESS YPPAPTAPYP APTRYLSSQN FSIGQAIQQP 360 DNYISIGQQA GPLPVGPMTT RQLTLPLDQI NQLPNFWNSS PRHVIGSAAP GNLHFGPPSV 420 FGNQNQPLVS GPHSINQSTI FSPAIDHCQF VPAATSLDED IAQQLSFDDL DDLPWFENWS 480 EGPIENAWER TLSAA

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MSSKESSLAK TLERSPAKFD ATGLRVLLVG DNPASVEPLK KALQEICKHE VTTCTVPKDA  60
PSLLLEKKRF DIVLIEYRMG DMDGFQILDS IQSMEKADDL PVIFLFSGGQ DMDVDVLKRG  120
VEKGVCDFLT KPIRDETLKL IWTHVFRSRL HRKEGVIVNN DAVSEVNRRD RLDSPIQSSS  180
GHDSAALGMS EGSSGMKRGR DHAEDQPDES NDSIGTASAA AITKKPRVHW TPDLQQKFVE  240
AIDRIDKRKN PGRRFRNDES EEQAVPKEIL DELRRMGVTG LTRQNISSHL QKHRTSKKKQ  300
GQLSELQNGP LITMNYSSPG QYSSLSIESS YPPAPTAPYP APTRYLSSQN FSIGQAIQQP  360
DNYISIGQQA GPLPVGPMTT RQLTLPLDQI NQLPNFWNSS PRHVIGSAAP GNLHFGPPSV  420
FGNQNQPLVS GPHSINQSTI FSPAIDHCQF VPAATSLDED IAQQLSFDDL DDLPWFENWS  480
EGPIENAWER TLSAA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16857.1	4e-38	ARR-B family protein