PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM67371.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WRKY

Protein Properties

Length: 998aa MW: 109909 Da PI: 8.1692

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM67371.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	93	2.2e-29	238	296	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK kg+++pr+YYrCt+a gCpv+k+v+r a+d+ ++++tYeg+Hnh+ OWM67371.1 238 SDGCQWRKYGQKLAKGNPCPRAYYRCTMAvGCPVRKQVQRYAQDKAILVTTYEGSHNHP 296 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 998 aa Download sequence
MTTHLTGDDD QPEYQQVDEK RDIREFVDFF SGERHGRPDD SAPDVDLPKE SSITESSINQ 60 RLTLNTGWLT EEEDRTVTKP SLHQLMNSNL RVKLGELKDE NQNLRRMLDR VTKSYAGLQT 120 QLALLKQDEV LKLANATYCA GDDSQERAMI SPPRKVKPAL FSELEAGEGS STIKTEGDDG 180 TNNSIVDNQM PPCHGTLKSM TMPMAQGKAG SMEEDVPEGS LRRARVSIRA RSDAPMISDG 240 CQWRKYGQKL AKGNPCPRAY YRCTMAVGCP VRKQVQRYAQ DKAILVTTYE GSHNHPLPAA 300 AAALAATTSA AAAMLLSGST ISSGPTPFLP PFVSPHHQYA TSMASYSPSS PYPTITLDLS 360 HSPLLSGPNI IHWPPMPPPP IFDTYVSSDS HVLPGSLLGH PQNSHSFTQT VRAAISADPG 420 QDLSAETRAS SDKPSVELQK SPVTFSLHSS GNIAAKFAYD QVIVGAFRKI PKATWNAKER 480 VWMFPVSSLS AAEKVLSEIC GSSVEIVNLD PLVRRAIAAA SSLPDLQDRY ERIPNDVELK 540 LLPFQRDGVR FVLQHGLRVL IADEMGLGKT LQAAIAVAAC VRDSWPVLVL SPSSLRLHWA 600 SVLLSQGGGS NRGGFRIVYS NNKHGVHLDG LFNVISYDAV PKIQNALLSS DFKVVIADES 660 HFLKNAQAKR TTASLPVIKK AQYAILLSGT PALSRPIELF KQLEALYPEV YKNVHEYGNR 720 YCKGGIFGVY QGASNHEELH NLMKATVMIR RLKKDVLNQL PVKRRQQVFL DLAEKDMRKI 780 NALFRELKTI KEKIKACTSK EEAESLKFTE KNLITKIYTD SAEAKIPAVI EYLETVVEKK 840 KVGCIRIDGS TPAVARQSFV TDFQEKDTIK AAVLSIRAGG VGLTLTAAST VIFAELSWTP 900 GDLIQAEDRA HRIGQVSSVN VYYLLANDTV DDIIWDVVQS KLENLGQMLD GRENTLEVSA 960 SHQSSTSPAK QKTLDSFLKR CSNDENSEHQ SKLKYPRH

Sequence ? help Back to Top

Protein Sequence Length: 998 aa Download sequence

MTTHLTGDDD QPEYQQVDEK RDIREFVDFF SGERHGRPDD SAPDVDLPKE SSITESSINQ  60
RLTLNTGWLT EEEDRTVTKP SLHQLMNSNL RVKLGELKDE NQNLRRMLDR VTKSYAGLQT  120
QLALLKQDEV LKLANATYCA GDDSQERAMI SPPRKVKPAL FSELEAGEGS STIKTEGDDG  180
TNNSIVDNQM PPCHGTLKSM TMPMAQGKAG SMEEDVPEGS LRRARVSIRA RSDAPMISDG  240
CQWRKYGQKL AKGNPCPRAY YRCTMAVGCP VRKQVQRYAQ DKAILVTTYE GSHNHPLPAA  300
AAALAATTSA AAAMLLSGST ISSGPTPFLP PFVSPHHQYA TSMASYSPSS PYPTITLDLS  360
HSPLLSGPNI IHWPPMPPPP IFDTYVSSDS HVLPGSLLGH PQNSHSFTQT VRAAISADPG  420
QDLSAETRAS SDKPSVELQK SPVTFSLHSS GNIAAKFAYD QVIVGAFRKI PKATWNAKER  480
VWMFPVSSLS AAEKVLSEIC GSSVEIVNLD PLVRRAIAAA SSLPDLQDRY ERIPNDVELK  540
LLPFQRDGVR FVLQHGLRVL IADEMGLGKT LQAAIAVAAC VRDSWPVLVL SPSSLRLHWA  600
SVLLSQGGGS NRGGFRIVYS NNKHGVHLDG LFNVISYDAV PKIQNALLSS DFKVVIADES  660
HFLKNAQAKR TTASLPVIKK AQYAILLSGT PALSRPIELF KQLEALYPEV YKNVHEYGNR  720
YCKGGIFGVY QGASNHEELH NLMKATVMIR RLKKDVLNQL PVKRRQQVFL DLAEKDMRKI  780
NALFRELKTI KEKIKACTSK EEAESLKFTE KNLITKIYTD SAEAKIPAVI EYLETVVEKK  840
KVGCIRIDGS TPAVARQSFV TDFQEKDTIK AAVLSIRAGG VGLTLTAAST VIFAELSWTP  900
GDLIQAEDRA HRIGQVSSVN VYYLLANDTV DDIIWDVVQS KLENLGQMLD GRENTLEVSA  960
SHQSSTSPAK QKTLDSFLKR CSNDENSEHQ SKLKYPRH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G22070.1	5e-50	WRKY family protein