PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM67297.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | ERF | ||||||||
Protein Properties | Length: 233aa MW: 25824.7 Da PI: 4.7186 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.5 | 9.4e-20 | 91 | 141 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr ++ +g+++AeIrd + ng r+++g+f+taeeAa a+++a+ +++g OWM67297.1 91 QYRGVRKRP-WGKYAAEIRDSTRNG--VRVWIGTFDTAEEAALAYDQAAFAMRG 141 59*******.**********44465..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MDYTPSSSFF HYPTSDLSAD SSSFNSSSGF FSLPFDENDS EEMLLYGVLA AAPGMDYSAY 60 ATSSAYSHPR DEEVCSKPDF DPETAPKEVI QYRGVRKRPW GKYAAEIRDS TRNGVRVWIG 120 TFDTAEEAAL AYDQAAFAMR GSAAVLNFPV EVVHRSLQDL GGDDQGQCRD VAGMSGCDSP 180 VLALKKRHLQ KRKSEIKKKR ERELTPKNAV VLEDLGAAYL EELLKISEDP SPW |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 185 | 200 | KKRHLQKRKSEIKKKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 2e-37 | ERF family protein |