PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM67219.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 265aa    MW: 30262.8 Da    PI: 6.721
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM67219.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.44.8e-202878155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                + y+GVr++  +g+WvAeIr+p++   r+r +lg+f taeeAa a+++a+++l+g
  OWM67219.1 28 CSYRGVRQRT-WGKWVAEIREPKK---RTRLWLGSFATAEEAAMAYDEAARRLYG 78
                67*****999.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MENCRKSPFK PWKKGPARGK GGPQNASCSY RGVRQRTWGK WVAEIREPKK RTRLWLGSFA  60
TAEEAAMAYD EAARRLYGPE AYLNLPHLQA GQSFPNKAHN KFKWFPSRNF ISMFPSCGLL  120
NLNAQPSVHV IHQRLQELQH RTGPSDSKAE KTDRDDHRSK EKDQVETGPS EEKPQIDLNE  180
FLQQMGILKG EDPPEKNDSE EHNQVVQETP FKEYDPLAIF EDKNFDWDAL IEMQGFGGHQ  240
EGGTSSCQLY DIGEGLTLPS TIWNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57600.16e-76ERF family protein