PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM66777.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GRAS
Protein Properties Length: 697aa    MW: 78260.2 Da    PI: 5.733
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM66777.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS353.72.8e-1083206893373
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                 +lL+ cA+av+++d++    l++++++++sp+gd +qRla+yf+++L+arla++ +  y a + + ts    ++ l+a++++++++P+ ++s++ aN++
  OWM66777.1 320 TLLTLCAQAVATNDHRSSMGLIKQIRQHSSPYGDGNQRLAHYFVNGLEARLAGTETPSYLATAGKGTS---AADLLKAYQFYVQACPFKRMSNFFANRT 415
                 68999************************************************665556555555554...99************************** PP

        GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 I++ +e+++++HiiDf+i +G+QWp+L+q ++ R++gpp++R+Tg++ p++g   +e++eetg+rLak++e++gv+fe+++ +ak++e+++le+L +++
  OWM66777.1 416 IMKKAEKATTLHIIDFGILYGFQWPCLIQRISMRRGGPPKIRMTGIELPQPGfrPTERVEETGRRLAKYCERFGVEFEYHT-IAKKWETIQLEDLMIDR 513
                 ***************************************************9*****************************.7**************** PP

        GRAS 199 gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleakl.preseerikvErellgreivn 296
                 ++ ++Vn+ ++l +l+desv ++s+rd vLkl+++++P+++v+   +  +n++ Fl+rf eal ++s+lfd+++++   re+e+r++ Ere+++r+++n
  OWM66777.1 514 DDFTVVNCLYRLRNLPDESVVMNSPRDMVLKLIRKIEPDLFVHGVVNGTYNAPFFLTRFREALFHFSSLFDMFDVGQdDRENEQRMMFEREVFARDAMN 612
                 *************************************************************************776515667***************** PP

        GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                 v+aceg +r+er et+++W+ r  +aGF+++pl e++ +++k  +   + + + v+++ +++++gWk+r +++vS+W
  OWM66777.1 613 VIACEGVARVERPETYKQWQVRNIRAGFRQIPLCENIFNKVKNFVGLEYHKDFIVDQDGHWMLQGWKGRVIYAVSCW 689
                 ************************************************9888************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 697 aa     Download sequence    
MDSLLTEPSN FLADLKFSHG SISIPPTKNL VNGFKRRGGF SNPVNDPSPP SSTSSEVESP  60
EDSDSSTSNS ILKFISEILM EEDLEEKPCM LQDCLALQAA EKSFYDVLNQ EYVPSFDCRQ  120
PVSDQIADNP TLSSPQESSS DSSNTNSCSC SVNGSIGAIQ APESGNLVAP CVHLTDSLIS  180
TFRLLDSYSS SDGFGKNIFV DRSMTFGSAR EAISKGGQNS VSGSKGKKSH GREEGDFPQE  240
GRSNKQSAVF VEEPEQLELF DEVLLCQPGR NEQKCPLFDD CEDELSRKSS PNGPTKGSNG  300
RSGTRRKKNS AKGEVIDLWT LLTLCAQAVA TNDHRSSMGL IKQIRQHSSP YGDGNQRLAH  360
YFVNGLEARL AGTETPSYLA TAGKGTSAAD LLKAYQFYVQ ACPFKRMSNF FANRTIMKKA  420
EKATTLHIID FGILYGFQWP CLIQRISMRR GGPPKIRMTG IELPQPGFRP TERVEETGRR  480
LAKYCERFGV EFEYHTIAKK WETIQLEDLM IDRDDFTVVN CLYRLRNLPD ESVVMNSPRD  540
MVLKLIRKIE PDLFVHGVVN GTYNAPFFLT RFREALFHFS SLFDMFDVGQ DDRENEQRMM  600
FEREVFARDA MNVIACEGVA RVERPETYKQ WQVRNIRAGF RQIPLCENIF NKVKNFVGLE  660
YHKDFIVDQD GHWMLQGWKG RVIYAVSCWV PAEEASS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein