PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM66416.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GATA
Protein Properties Length: 298aa    MW: 32672.3 Da    PI: 5.305
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM66416.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.49.8e-19218252135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 Cs+Cg+ kTp+WR gp g ktLCnaCG+++++ +l
  OWM66416.1 218 CSHCGVQKTPQWRAGPMGAKTLCNACGVRFKSGRL 252
                 *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MEFFGVSVQG GVAPEEFSVD DLLNFANDDV VVGAEEEEEE EEEEEERHAS RKHEEDRGLC  60
SVSGETGALP RGEESSMEIS FPADDLADLE WLSQFVDDSF DLSEPLPASS PANPVSHRYE  120
DRSEPELRSP GKLCFNAPVP GKARSKRART GGRVWSLRLG RFPGSPSSSG SCSDPGSLSQ  180
GLELGYSGPN PLVKKHKIKN RPGREVSAGL AQQPVRRCSH CGVQKTPQWR AGPMGAKTLC  240
NACGVRFKSG RLLPEYRPAC SPTFCSELHS NHHRKVLEMR QKKEPSDQPE QPPIVSGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.22e-68GATA family protein