PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM66282.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | ERF | ||||||||
Protein Properties | Length: 175aa MW: 18708.9 Da PI: 8.4648 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.8 | 9.7e-17 | 25 | 74 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ykG+r +k +g+WvAe+r+p +kr r++lg++ t+ Aa+a++ a +l+g OWM66282.1 25 PYKGIRMRK-WGKWVAEVREP---NKRSRIWLGSYSTPVAAARAYDTAVFYLRG 74 59*****99.*******9998...337*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
MESGESVETR KRCGGGGGGG TRERPYKGIR MRKWGKWVAE VREPNKRSRI WLGSYSTPVA 60 AARAYDTAVF YLRGPSARLN FPEFVAAEGV ASGADGGVDV SAAFIRRKAA EVGARVDAAL 120 NRGLNGMVGC GDYESCCEVK MSSGGSNSSC GRSVLEKVDL NKLPNPEDYS DSDEQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23340.1 | 9e-51 | ERF family protein |