PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM66235.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Protein Properties

Length: 456aa MW: 51862.5 Da PI: 6.4572

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM66235.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	55.2	1.3e-17	100	182	1	89
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k+l++s+ + r+ lp f +e+ ++e++tl++e+e+g +e ++ s+ +l++GW++F++a++LkegD++vF+l++ ++ OWM66235.1 100 FVKTLLRSHCQDRYRMGLPGYFSREYL--PHEDVTLVIENEDGVCYETRY----FSRDAMLGAGWRQFCHAHQLKEGDVLVFQLVEPTK 182 89**********************5..45789************....455579*********************986533 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
MAEEDSATAP PSQLLEPWPK STGKVKKPME KKSDESKTKR KRKHSFTKTM HAESNEHGNS 60 TSVMRTKSTV DGTSPHLEAN SAIGRALEVQ SNLEPAFPSF VKTLLRSHCQ DRYRMGLPGY 120 FSREYLPHED VTLVIENEDG VCYETRYFSR DAMLGAGWRQ FCHAHQLKEG DVLVFQLVEP 180 TKLKAYIVKI DNLNEVDGAL GLLGLDASAK RLYPDDDRVE EKGREPAESE HLETPCSSYH 240 RRKKKKKLPE QTSEQSRNQS EEIVSEVLEG SKSGVCDTQF EGIRSLEDFK ILVNGKVMDS 300 EFPEDIRRKY YELCLSQGSF LHANIVEGIN DQLVASSISE TVSVADAIRS CNRGTARVTA 360 WDRTLKALEM LGMNVGFLRD RVKRLMGLNF DSDNTEQRYK VAERERARAS EEIRKMEARL 420 KEMKEEKEKL SAEVESLRVK AESLRVEYLE EATAPW

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

MAEEDSATAP PSQLLEPWPK STGKVKKPME KKSDESKTKR KRKHSFTKTM HAESNEHGNS  60
TSVMRTKSTV DGTSPHLEAN SAIGRALEVQ SNLEPAFPSF VKTLLRSHCQ DRYRMGLPGY  120
FSREYLPHED VTLVIENEDG VCYETRYFSR DAMLGAGWRQ FCHAHQLKEG DVLVFQLVEP  180
TKLKAYIVKI DNLNEVDGAL GLLGLDASAK RLYPDDDRVE EKGREPAESE HLETPCSSYH  240
RRKKKKKLPE QTSEQSRNQS EEIVSEVLEG SKSGVCDTQF EGIRSLEDFK ILVNGKVMDS  300
EFPEDIRRKY YELCLSQGSF LHANIVEGIN DQLVASSISE TVSVADAIRS CNRGTARVTA  360
WDRTLKALEM LGMNVGFLRD RVKRLMGLNF DSDNTEQRYK VAERERARAS EEIRKMEARL  420
KEMKEEKEKL SAEVESLRVK AESLRVEYLE EATAPW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	26	41	KKPMEKKSDESKTKRK
2	241	247	RRKKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42700.1	2e-23	B3 family protein