PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM66231.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family LBD
Protein Properties Length: 339aa    MW: 36464.8 Da    PI: 7.2938
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM66231.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260136.21.2e-4271061100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 
                 +CaaCk++rrkC+++C++apyfpa+qp+kfa++hk+FGasnv kll++l  ++reda++sl+yeAe r+rdPvyG+vg+i+ lqq+l+ l++el ++++
  OWM66231.1   7 PCAACKLQRRKCTQECIFAPYFPADQPQKFAYIHKVFGASNVAKLLSELGVHQREDAVHSLAYEAETRLRDPVYGCVGLISILQQKLRLLQNELTSARK 105
                 7*********************************************************************************************99988 PP

      DUF260 100 e 100
                 e
  OWM66231.1 106 E 106
                 7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MSSSSSPCAA CKLQRRKCTQ ECIFAPYFPA DQPQKFAYIH KVFGASNVAK LLSELGVHQR  60
EDAVHSLAYE AETRLRDPVY GCVGLISILQ QKLRLLQNEL TSARKELATY IGPQAMLPML  120
PAGHQAGPPG AFAQHMGGTG PSSSLAVTPY MGAVPVPLPP HHQPSGALVI REPQAQAQHQ  180
QQQVGFDPHG HQIVAAAAAH QEMYRGLYER QRQQQEIKFS GAGGFDGIML GNGYNHPGAG  240
GVAAQAAVSP SLALGGTFEP VAAYQIHQPG DPHAHHAGSS SGAAFHHQHP DQPHHQHNFQ  300
PHLSLQPQHQ QTMVHQPEQQ EQQGSGSDER KSCVEGPSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66870.13e-65LBD family protein