PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM66153.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

FAR1

Protein Properties

Length: 752aa MW: 86553 Da PI: 7.5813

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM66153.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	82	9.9e-26	86	189	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgkwevtkleleHn 86 +fY++YAk+vGF+ +++s++s+ +g++++++fvC+++g++ e+ ++ +++ r +r+ ++t+Cka+++vk++ dg+w + ++ +eHn OWM66153.1 86 SFYKDYAKSVGFNPIIKASRRSRISGKFIDAKFVCTRYGNKPESAEEpastsenltfpvkKKRGRINRSWEKTDCKASMHVKRRPDGRWIICSFIKEHN 184 5***************************************999999*****998888899***************************** PP FAR1 87 Helap 91 Hel p OWM66153.1 185 HELLP 189 975 PP

Sequence ? help Back to Top
Protein Sequence Length: 752 aa Download sequence
MEMDLGQPAG SNWNSNIGGG GNEGPDRDGD ITDPPCNTND RIEPHVDGTQ SNVRDTVFGD 60 EGNVDRLKSV ELHDGMDFES KEEAFSFYKD YAKSVGFNPI IKASRRSRIS GKFIDAKFVC 120 TRYGNKPESA EEPASTSENL TFPVKKKRGR INRSWEKTDC KASMHVKRRP DGRWIICSFI 180 KEHNHELLPD QASYPTGHGD PDIRENDRDA LQAGQAKQMY MMAKQFSGSK KPHNQVGHLT 240 NQHECEVHLR LDEGDAQALL DHFLRMQEEN PNFFYSLDLN QQHRLRNVFW VDAKSRLDYR 300 HFGDVVFFDI VYIKNEYKLP LVSFIGVNHH FQSLLLGCAL VADETKLTYT WLMKVWLKAM 360 GGRSPQVMLT DQDIALKEAI AEVMPDSRHC FCLWHILNKV PEKVNYVIMQ DENFRKKLDK 420 CIFRSSTNEQ FERRWKKIVD RFGLGANMWL LSLYEDREQW APTYMRGIFL AGMSKAQRSD 480 GVSSFFDKFM QRRTTLKEFL EQYGDILLEK YEDEAKSDFE SWRKQPALKS PSPFGKQMAA 540 VYTHEVFRKF QAEILGAVAC HPRKESKDGR VTSFRVQDFQ ENRDHIVVRN EATADLSCSC 600 HCFEFNGFLC RHVLIVLQVC GAYRIPSQYI LKRWTKIAKS RYSMIQEQSV VTSRVQRYND 660 ICWQALKLGD EGSLSKQSYD TALSALEEAI KKCSSLNDSI KYVPILQPSH ESHDLAKVDH 720 DIGSTEKEKK HSIPEEGKIQ KGAEVISFGR IT

Sequence ? help Back to Top

Protein Sequence Length: 752 aa Download sequence

MEMDLGQPAG SNWNSNIGGG GNEGPDRDGD ITDPPCNTND RIEPHVDGTQ SNVRDTVFGD  60
EGNVDRLKSV ELHDGMDFES KEEAFSFYKD YAKSVGFNPI IKASRRSRIS GKFIDAKFVC  120
TRYGNKPESA EEPASTSENL TFPVKKKRGR INRSWEKTDC KASMHVKRRP DGRWIICSFI  180
KEHNHELLPD QASYPTGHGD PDIRENDRDA LQAGQAKQMY MMAKQFSGSK KPHNQVGHLT  240
NQHECEVHLR LDEGDAQALL DHFLRMQEEN PNFFYSLDLN QQHRLRNVFW VDAKSRLDYR  300
HFGDVVFFDI VYIKNEYKLP LVSFIGVNHH FQSLLLGCAL VADETKLTYT WLMKVWLKAM  360
GGRSPQVMLT DQDIALKEAI AEVMPDSRHC FCLWHILNKV PEKVNYVIMQ DENFRKKLDK  420
CIFRSSTNEQ FERRWKKIVD RFGLGANMWL LSLYEDREQW APTYMRGIFL AGMSKAQRSD  480
GVSSFFDKFM QRRTTLKEFL EQYGDILLEK YEDEAKSDFE SWRKQPALKS PSPFGKQMAA  540
VYTHEVFRKF QAEILGAVAC HPRKESKDGR VTSFRVQDFQ ENRDHIVVRN EATADLSCSC  600
HCFEFNGFLC RHVLIVLQVC GAYRIPSQYI LKRWTKIAKS RYSMIQEQSV VTSRVQRYND  660
ICWQALKLGD EGSLSKQSYD TALSALEEAI KKCSSLNDSI KYVPILQPSH ESHDLAKVDH  720
DIGSTEKEKK HSIPEEGKIQ KGAEVISFGR IT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	0.0	FAR1 family protein