PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM66151.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 357aa    MW: 39619.6 Da    PI: 6.5187
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM66151.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.43.9e-11181227455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  h ++Er+RR+++ + f  L  ++P +     kK++Ka++L +A +Y+k+Lq
  OWM66151.1 181 DHVMAERKRREKLSQHFVALSAVVPGL-----KKMDKASVLGEAAKYVKELQ 227
                 699************************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    
MMETTASAKW LPELETEDIP IIPVFTNYYP MNSYLGEYSL DDLDFHSFSS ENYSLNHKAV  60
PNFSASSVET CQVVTERPTK QLRTMSSSSS SSQIISFGNS GSPPIKTKSE KFYGADGTGQ  120
AVKPKTETIS SDGNLSFQSH LISQGDSYQI GENIEAISGQ GKYSNKRAHA SMSRAPLHGQ  180
DHVMAERKRR EKLSQHFVAL SAVVPGLKKM DKASVLGEAA KYVKELQERL KKLEEEALRK  240
TVESVVLVRK SQVTTDDDSS SSDENSCNQS DQELPEIEAR VSGKHILIRV HCERRHGYIS  300
KIVNLIEKLN LSVISNSVIP FGSSILDITI VAQMDGNFSV TIEDLVRNLR RDLLNLI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1186191ERKRRE
2187192RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22750.27e-45bHLH family protein