PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM66149.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 309aa MW: 34341.9 Da PI: 6.7944

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM66149.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.7	4.4e-13	133	179	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++ ++f L ++P++ kK++Ka++L Av+YIk+L+ OWM66149.1 133 DHVIAERKRREKLSQRFIALSAVIPSL-----KKMDKATVLGDAVKYIKQLK 179 6999*********************.....9***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence
MNPSFSDYSL DLDDLDFPSF SLENYSLNHE AAPNFSASSV ETFQPSTERA AKQLKMSPSS 60 SPFQIISFGN SGSPPSRTKS MTPDGNVSFP SHVISHGYSY QLGENIKDIS EQGSHSNKRG 120 HGAMNRTPLH AQDHVIAERK RREKLSQRFI ALSAVIPSLK KMDKATVLGD AVKYIKQLKG 180 RLEKLEEELS RKTVESVVVV KKSQVAMDDC SYSSDESSCD QSNQELPEIE ARVSEKHVLV 240 KVHCERRQGC ISKILNLIEK MNLSVLSNSV IPFGSSILDI TIVAQMEGEL PMTIEDLTKN 300 LRQNLLNLI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	138	143	ERKRRE
2	139	144	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	8e-39	bHLH family protein