PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM65725.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 338aa    MW: 36445.6 Da    PI: 7.0104
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM65725.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH391.4e-12198243655
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +++Er RR ri +++ +L+el+P+     +k  + a++L +AveY+k Lq
  OWM65725.1 198 SIAERVRRTRISDRIRKLQELVPNM----DKQTNTADMLDEAVEYVKFLQ 243
                 689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MQAPPSGGGE PARSGLARFH SAPAPWLEAL LEDEEEDPLK QNHFFTQLLA GAVNPPPPTI  60
PSRTSSDLSA ASPSYGAGAA SGHFLRQNSS PADFLGSSSM DESDVYFSNY GVPGDIDFVS  120
PDMGVSPSGK RGRGLQSAQQ LSGDYNPHNL TTEQQDGGQT RGGGGGGGVD AACMEKLLED  180
SVSFRVRAKR GCATHPRSIA ERVRRTRISD RIRKLQELVP NMDKQTNTAD MLDEAVEYVK  240
FLQKQIQEHA MWGFYDRSSM KNCRSYLSFR RTVDALRESK LDGGTTAAGT ATCGGSSAAP  300
RHHLLLHEPA VSLLGLTNIS SYIGPLLPRY KLVSYKSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G35460.16e-44bHLH family protein