PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM65653.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 293aa    MW: 32509.3 Da    PI: 6.4364
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM65653.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.41.2e-13103154155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +r++h ++Er+RR+++N+ ++ Lr+++P++   + ++ + a+i   A++++k+L+
  OWM65653.1 103 QRMTHIAVERNRRRQMNDYLAILRSMMPPS---YVQRGDQASIIGGAINFVKELE 154
                 79****************************...9******************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MALETVVFQQ DPFSCKDSWP YSLLRQYLDD ADHQDSEYYS SSTARENSDN LKDNLGEIST  60
NSSASSEDNG GGTGGFPSVA AVTVRRKRRR ARPVKNTEEV ENQRMTHIAV ERNRRRQMND  120
YLAILRSMMP PSYVQRGDQA SIIGGAINFV KELEQLHHSL EALKETNLSP TQHSPSIFSD  180
FFTFPQYSTT TTRHSGSSSS EAAIADVEVT VADGHANIKV RSRRQPAQLL KMVLGLHSLR  240
LHVLHLTVTA ADPVVLFSFS AKVEESCELN SANEIAAAVH ELVARIQEQA CCV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18690RKRRR
2104115RMTHIAVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.16e-71bHLH family protein