PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM65484.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Trihelix

Protein Properties

Length: 1758aa MW: 194828 Da PI: 8.8623

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM65484.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	68	1.9e-21	1665	1745	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ +ev++Li++r e++++++ k +++lW+e+s ++++gf+rs+ qCk+ w +l ++y++ik g+k++ +++pyf++++ OWM65484.1 1665 KWKPEEVKKLIKLRGELHSKFQVVKGRMALWDEISTDLSAHGFSRSSAQCKSLWASLVQKYEEIKSGNKSK-----KSWPYFEEMN 1745 7******************************************************************95.....56*****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1758 aa Download sequence
MGKFYLVHFL CLTWSLVFPG THQLQSSQRQ VLQQLRKHLE YPSQLEMWTT HGLDLCFLPP 60 SPNVNLTCEK NSVTELQLVG DKFAASARRS FQGYAIPGQT LSQNFSMDSL VTTLVRLTSL 120 RVLRLVSLGM WGSLPDKIHR LSSLEILDLN SNFLYGLVPP KISTMVKLQS LIFDDNYFNG 180 SAPDWFDSLR NMTVLSLRSN RLSGQFPLSL EKIRAVSEVY LSGNEIDGKV PDLSGLSNLR 240 VLNLSGNRFS SGLPEMPRSL IMASLGNNSF SGEIPKQYSQ LSHLQFFDVS FNMLRGKPLA 300 GLFSLPNITY LNFATNMLSG SLSVHTSCSK KLGFVDLSNN KLKGGLPACL RSQSGNRTVN 360 SNGNCLSTDA ENQHSESYCA EVPEMKPSRG ENVGALVAVI GGSVVLICLL GFSILTLYMR 420 CCSRGISGQR LLQKAAQDNS ATGFSSQVLR SGKYISETTK MSTLDLPPCR SFSLQELEEA 480 TDNFDKTAFI GDGSYGKLYK GRLQNGLQVA VRCLPSKRYS IRNLRLRLDL LSKLRHPNLV 540 CLLGHCIDAS GQDEPGFDRV FLVYEYVTNG NFQTCVSGNN PDKALRWSER LDVLIGVARA 600 VHFLHTGIIP GFFSNRLKSN NILLNEHRMA KLSDYGLSVI SGEIDKDQGA CSFRQKKSLE 660 DDGYSFGFII LESFLGPSTS SRKETLLHKE MAALNSPEGR RQMVDPVVLA TSSQDSLSVV 720 ISLAKKCISF EGSRPSFEDI LWNLQYAAQV QGTTLGIKKL QQKLRRLRTQ YMQFTELVSH 780 TGVGWDETTN TVKASAHVLD KFIKKNSGYK SFQAKGFKHY NSLNELFRSK TATDETLRPM 840 KLETLSSPFT SSKLLLMHQK MAAFSVLSPC SHFLPRLPSR SSRLVSCSVG SPAIVAHPLF 900 NATLDTRGSK VPRKRVGRMD GAGKTMEDSV KRKMEQFYEG SNGPPLRILP IGGLGEIGMN 960 CMLVGNFDRY ILIDAGVMFP DYDELGVQKI IPDTTFIKRW SHKIEAVVIT HGHEDHIGAL 1020 PWVVPALDSC TPIYASSFTM ELIKKRLKEN GIFVPSRLKV FKMKKRFMAG PFEIEPIRVT 1080 HSIPDCCGLV LRCTDGTILH TGDWKIDESP LDGNVFDRES LEELSKEGVT LMMSDSTNVL 1140 SPGRTVSEAV VADSLIRHIS EAKGRVITTQ FASNIHRLGS IKTAADLTGR KMVLVGMSLR 1200 TYLDAAWKDG KGSIDPSTLI KAEDIDAYAP KDLLIVTTGS QAEPRAALNL ASYGGSHSLK 1260 LMKDDIILYS AKVIPGNETR VMKMMNRIAE IGSNIVMGRN AMLHTSGHGY REELDEVLKL 1320 VKPQHFVPVH GELLFLKEHE LLGKSTGIRH TTVIKNGEML GVSHLRNRRV LSNGFTSLGK 1380 ENLQLMYSDG DKAFGTSTEL CVDERLRIAS DGIIVVSMEI WRPQDIEGMT ERSLKGKIRI 1440 TTRCLWLDKG KLLDALHKAA HAALSSCPVN CPLAHMERTV SELLRKMVRK YSGKRPEVIA 1500 IAVENPEAVL SDEIQERLSG RSQVTFGMSP LKKVVGGSPK KTKSSKKGVE GEKESQHPDN 1560 YSEEESLGVE PHRILPEDET AIASSDVLES ESPAANSDNF WSSFLSSSSP SVDETVKNEN 1620 GSMLKEEHEA EIITSDASDV SEGESSDLEL PSSQEKPRKT VRRNKWKPEE VKKLIKLRGE 1680 LHSKFQVVKG RMALWDEIST DLSAHGFSRS SAQCKSLWAS LVQKYEEIKS GNKSKKSWPY 1740 FEEMNAILSD LGETATAK

Sequence ? help Back to Top

Protein Sequence Length: 1758 aa Download sequence

MGKFYLVHFL CLTWSLVFPG THQLQSSQRQ VLQQLRKHLE YPSQLEMWTT HGLDLCFLPP  60
SPNVNLTCEK NSVTELQLVG DKFAASARRS FQGYAIPGQT LSQNFSMDSL VTTLVRLTSL  120
RVLRLVSLGM WGSLPDKIHR LSSLEILDLN SNFLYGLVPP KISTMVKLQS LIFDDNYFNG  180
SAPDWFDSLR NMTVLSLRSN RLSGQFPLSL EKIRAVSEVY LSGNEIDGKV PDLSGLSNLR  240
VLNLSGNRFS SGLPEMPRSL IMASLGNNSF SGEIPKQYSQ LSHLQFFDVS FNMLRGKPLA  300
GLFSLPNITY LNFATNMLSG SLSVHTSCSK KLGFVDLSNN KLKGGLPACL RSQSGNRTVN  360
SNGNCLSTDA ENQHSESYCA EVPEMKPSRG ENVGALVAVI GGSVVLICLL GFSILTLYMR  420
CCSRGISGQR LLQKAAQDNS ATGFSSQVLR SGKYISETTK MSTLDLPPCR SFSLQELEEA  480
TDNFDKTAFI GDGSYGKLYK GRLQNGLQVA VRCLPSKRYS IRNLRLRLDL LSKLRHPNLV  540
CLLGHCIDAS GQDEPGFDRV FLVYEYVTNG NFQTCVSGNN PDKALRWSER LDVLIGVARA  600
VHFLHTGIIP GFFSNRLKSN NILLNEHRMA KLSDYGLSVI SGEIDKDQGA CSFRQKKSLE  660
DDGYSFGFII LESFLGPSTS SRKETLLHKE MAALNSPEGR RQMVDPVVLA TSSQDSLSVV  720
ISLAKKCISF EGSRPSFEDI LWNLQYAAQV QGTTLGIKKL QQKLRRLRTQ YMQFTELVSH  780
TGVGWDETTN TVKASAHVLD KFIKKNSGYK SFQAKGFKHY NSLNELFRSK TATDETLRPM  840
KLETLSSPFT SSKLLLMHQK MAAFSVLSPC SHFLPRLPSR SSRLVSCSVG SPAIVAHPLF  900
NATLDTRGSK VPRKRVGRMD GAGKTMEDSV KRKMEQFYEG SNGPPLRILP IGGLGEIGMN  960
CMLVGNFDRY ILIDAGVMFP DYDELGVQKI IPDTTFIKRW SHKIEAVVIT HGHEDHIGAL  1020
PWVVPALDSC TPIYASSFTM ELIKKRLKEN GIFVPSRLKV FKMKKRFMAG PFEIEPIRVT  1080
HSIPDCCGLV LRCTDGTILH TGDWKIDESP LDGNVFDRES LEELSKEGVT LMMSDSTNVL  1140
SPGRTVSEAV VADSLIRHIS EAKGRVITTQ FASNIHRLGS IKTAADLTGR KMVLVGMSLR  1200
TYLDAAWKDG KGSIDPSTLI KAEDIDAYAP KDLLIVTTGS QAEPRAALNL ASYGGSHSLK  1260
LMKDDIILYS AKVIPGNETR VMKMMNRIAE IGSNIVMGRN AMLHTSGHGY REELDEVLKL  1320
VKPQHFVPVH GELLFLKEHE LLGKSTGIRH TTVIKNGEML GVSHLRNRRV LSNGFTSLGK  1380
ENLQLMYSDG DKAFGTSTEL CVDERLRIAS DGIIVVSMEI WRPQDIEGMT ERSLKGKIRI  1440
TTRCLWLDKG KLLDALHKAA HAALSSCPVN CPLAHMERTV SELLRKMVRK YSGKRPEVIA  1500
IAVENPEAVL SDEIQERLSG RSQVTFGMSP LKKVVGGSPK KTKSSKKGVE GEKESQHPDN  1560
YSEEESLGVE PHRILPEDET AIASSDVLES ESPAANSDNF WSSFLSSSSP SVDETVKNEN  1620
GSMLKEEHEA EIITSDASDV SEGESSDLEL PSSQEKPRKT VRRNKWKPEE VKKLIKLRGE  1680
LHSKFQVVKG RMALWDEIST DLSAHGFSRS SAQCKSLWAS LVQKYEEIKS GNKSKKSWPY  1740
FEEMNAILSD LGETATAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	0.0	Trihelix family protein