PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM65418.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | LBD | ||||||||
Protein Properties | Length: 155aa MW: 16919.2 Da PI: 7.8577 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 145.4 | 1.7e-45 | 8 | 106 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC ++C++apyfp e+p+kfanvhk+FGasnv kll+++p+++r+da+ssl+yeAear+rdPvyG+vg i+ lq+q+e+l++el+++++ OWM65418.1 8 PCAACKFLRRKCLPGCIFAPYFPPEEPQKFANVHKIFGASNVAKLLNEIPPHQRDDAVSSLAYEAEARVRDPVYGCVGAISFLQRQVERLQKELDAANA 106 7*********************************************************************************************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence |
MTSTYNSPCA ACKFLRRKCL PGCIFAPYFP PEEPQKFANV HKIFGASNVA KLLNEIPPHQ 60 RDDAVSSLAY EAEARVRDPV YGCVGAISFL QRQVERLQKE LDAANADLIT YAHNNEIDPS 120 TSIISTSVQQ PAPSGFGGGV GFSRRSAYAL PYPLP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63090.2 | 1e-71 | LBD family protein |