PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM65418.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family LBD
Protein Properties Length: 155aa    MW: 16919.2 Da    PI: 7.8577
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM65418.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260145.41.7e-458106199
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 
                 +CaaCk+lrrkC ++C++apyfp e+p+kfanvhk+FGasnv kll+++p+++r+da+ssl+yeAear+rdPvyG+vg i+ lq+q+e+l++el+++++
  OWM65418.1   8 PCAACKFLRRKCLPGCIFAPYFPPEEPQKFANVHKIFGASNVAKLLNEIPPHQRDDAVSSLAYEAEARVRDPVYGCVGAISFLQRQVERLQKELDAANA 106
                 7*********************************************************************************************99876 PP

Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MTSTYNSPCA ACKFLRRKCL PGCIFAPYFP PEEPQKFANV HKIFGASNVA KLLNEIPPHQ  60
RDDAVSSLAY EAEARVRDPV YGCVGAISFL QRQVERLQKE LDAANADLIT YAHNNEIDPS  120
TSIISTSVQQ PAPSGFGGGV GFSRRSAYAL PYPLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63090.21e-71LBD family protein