PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM65184.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | CO-like | ||||||||
Protein Properties | Length: 306aa MW: 34604.1 Da PI: 5.1144 | ||||||||
Description | CO-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 31.4 | 3.9e-10 | 56 | 101 | 3 | 42 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 ++C+ +e+ ++ l Ce + +lC++C +e+H+ H +vp+ OWM65184.1 56 VWVCNSCEKAPADLICEADAAFLCRSCDDEIHSAnvlaqrHVRVPV 101 689*****************************66888888888775 PP | |||||||
2 | CCT | 67.8 | 2.9e-23 | 243 | 285 | 1 | 43 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 Rea++lRYkeK+k Rk+eKk+rY+sRKa+AesRpRvKGrF+++ OWM65184.1 243 REAKVLRYKEKKKARKYEKKVRYASRKAYAESRPRVKGRFASK 285 9****************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 306 aa Download sequence |
METVNLLGIS SCWSCDLCKA GARIFYCHDH SAYFCILCDQ RVHSISSAGP EQHERVWVCN 60 SCEKAPADLI CEADAAFLCR SCDDEIHSAN VLAQRHVRVP VKSVPCVASD QNEHADTLFD 120 FGGGYLGQEA CEEINDDETD SWLLLDPAIP DENLCPEYQP PDHSNYWDNS RCLKEPKQQE 180 YDLGKDAFIN SLSSQQTVPE SVTRISQKPA TITISNSYAM PLMGNSQIFL AGPPMIPCQM 240 MNREAKVLRY KEKKKARKYE KKVRYASRKA YAESRPRVKG RFASKLDIEL EVDQMFSLDE 300 YGCNLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24790.1 | 1e-35 | CO-like family protein |