PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM65047.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

CPP

Protein Properties

Length: 511aa MW: 55678.8 Da PI: 7.5388

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM65047.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	34.1	5.4e-11	243	281	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +++CnCkk+kC + C Cfa g +C+ +CkC++C N+++ OWM65047.1 243 SRSCNCKKTKCNSRHCGCFAVGIYCQTTCKCQNCLNDHK 281 789*********************************976 PP
2	TCR	39.6	1.1e-12	328	365	2	39
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++ gCnCk+s C+k YCeC++a++ C + C+Ce+C+N+ OWM65047.1 328 HRVGCNCKHSLCKKGYCECYQARVRCCDACRCEGCRNT 365 7889*********************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MAQQPLQPTG PSTPSLQDFA YGEFTYLPES EVDWNSMPSF AEGNYDLPLD SPIVASSPHP 60 SVNGKSTISV LPRHQTQQPP ATFNSSQLPG DELPNPQMQQ NGFISPMQGN GLNPQAGCEG 120 QLPYWAGKAV YGRHDGSTHS LWNTNFTPGG YFPQQPYFTN TGRAVSLPVG GGGFSRAMNG 180 TISNGRMAIQ VSNPDFSSAM MDDPRQKTFN YIRNGWQPSA TNQQSLQQIN RTNVENMTNN 240 STSRSCNCKK TKCNSRHCGC FAVGIYCQTT CKCQNCLNDH KSKDKIMEAR QSVLSRDSAA 300 FEPRVINNTE ILAQEQGNYV STTSTARHRV GCNCKHSLCK KGYCECYQAR VRCCDACRCE 360 GCRNTFGVKS GSRELANSLE QIARHPSFAE AQNIQGNYMA EPLSAPTLLH PLATNTPQLP 420 YRRGQDNHFT TVSFGGPTQE INLQLPGFNG LSESYPISNS QDLSAFPLPN FFQGITQSVA 480 AVTHAERQLG TAGIAPGEAS VQDDPGKSGH T

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MAQQPLQPTG PSTPSLQDFA YGEFTYLPES EVDWNSMPSF AEGNYDLPLD SPIVASSPHP  60
SVNGKSTISV LPRHQTQQPP ATFNSSQLPG DELPNPQMQQ NGFISPMQGN GLNPQAGCEG  120
QLPYWAGKAV YGRHDGSTHS LWNTNFTPGG YFPQQPYFTN TGRAVSLPVG GGGFSRAMNG  180
TISNGRMAIQ VSNPDFSSAM MDDPRQKTFN YIRNGWQPSA TNQQSLQQIN RTNVENMTNN  240
STSRSCNCKK TKCNSRHCGC FAVGIYCQTT CKCQNCLNDH KSKDKIMEAR QSVLSRDSAA  300
FEPRVINNTE ILAQEQGNYV STTSTARHRV GCNCKHSLCK KGYCECYQAR VRCCDACRCE  360
GCRNTFGVKS GSRELANSLE QIARHPSFAE AQNIQGNYMA EPLSAPTLLH PLATNTPQLP  420
YRRGQDNHFT TVSFGGPTQE INLQLPGFNG LSESYPISNS QDLSAFPLPN FFQGITQSVA  480
AVTHAERQLG TAGIAPGEAS VQDDPGKSGH T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22760.1	2e-38	CPP family protein