PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM64951.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | LBD | ||||||||
Protein Properties | Length: 226aa MW: 24380.8 Da PI: 8.0549 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 123.4 | 1.2e-38 | 20 | 120 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +C aCk+lrrkC+++Cv+apyf +eq + +fa+vhk+FGasn +kll lp+++r da+ +l+yeA ar+rdPvyG+v++i++lqqq+ +l++ela+++ OWM64951.1 20 PCGACKFLRRKCVNGCVFAPYFDSEQgATHFAAVHKVFGASNASKLLLCLPPHRRLDAVLTLCYEAIARVRDPVYGCVAHIFTLQQQVVNLQSELAYVQ 118 7***********************9989********************************************************************999 PP DUF260 99 ee 100 ++ OWM64951.1 119 AR 120 76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MQKTERSNNR GGGGGGASGP CGACKFLRRK CVNGCVFAPY FDSEQGATHF AAVHKVFGAS 60 NASKLLLCLP PHRRLDAVLT LCYEAIARVR DPVYGCVAHI FTLQQQVVNL QSELAYVQAR 120 LSTFRSFPSP PSLLNSQPSL QATSSDHMAL VLDNNISSYP NLPVPPALDP IELLQQATGE 180 MVDSSDTPST QQLADAQLQA IAREFISRYL PGVKIEPPGP PKGFQQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45420.1 | 2e-52 | LBD family protein |