PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM64883.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | ERF | ||||||||
Protein Properties | Length: 232aa MW: 25348.8 Da PI: 6.5486 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55 | 2e-17 | 50 | 99 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr ++ +g+Wv+eIr+p++ + r++lg+f tae+Aa+a++ +++++g OWM64883.1 50 TYRGVRMRS-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVGALAIKG 99 69****998.**********843...6*******************99988876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MTSSSDIDRT PREGGSKVRK EPRKAQELDN SAEDEPSKRR KGNNEGKHPT YRGVRMRSWG 60 KWVSEIREPR KKSRIWLGTF PTAEMAARAH DVGALAIKGR SAYLNFPELA MELPRPASNS 120 PKDIQAAAAK AAATTLSEQS RARSASSGSE AETSQVSVNL SRESSTQEST SCASTGDCDD 180 ALFDLPDLFS DSVDRGIGFT FSSSSSSSSL SWQLCGADSG SRMEETFLWE YY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44940.1 | 1e-62 | ERF family protein |