PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM64845.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Trihelix

Protein Properties

Length: 353aa MW: 39236.3 Da PI: 9.5185

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM64845.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	69	8.9e-22	45	136	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqlea 87 +W+++e+ aLi+a+r+++ lrrg+lk+p+W++v++++ + + ++++qC++k+e+l+kry+++ +++++ ++ +s++++f++++a OWM64845.1 45 CWSQEETVALIDAYRDKWYFLRRGNLKAPHWQDVADVVsrrcPAASLPKTAVQCRHKMEKLRKRYRAELQRARSLpVARFVSSWAHFKHMDA 136 7******************************9999977778899************************977999********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MTTEAAPDSS PPMGSPMHDD PPSSPAKETR SQPSSANPRR LPPPCWSQEE TVALIDAYRD 60 KWYFLRRGNL KAPHWQDVAD VVSRRCPAAS LPKTAVQCRH KMEKLRKRYR AELQRARSLP 120 VARFVSSWAH FKHMDAMEKG PGAPKDPESE EENEDMDDED DDELFEGIAP NSRSVYGLYG 180 NGVGHETPAA GKSGGGFRIK IPSAVSIAQP GIDHRKFDRS FDRSFGSGPS SGVNASGSNR 240 FARFGGGAGG GYGARVLRES ESGKVGLGKR ERDPMEEMVG AIRGLGDGFV RMERMKMEMA 300 REMENMRMEM EMKRTEMVLE SQQRIVDAFT RAVTEKPARK KKMAKRMPSP ENS

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MTTEAAPDSS PPMGSPMHDD PPSSPAKETR SQPSSANPRR LPPPCWSQEE TVALIDAYRD  60
KWYFLRRGNL KAPHWQDVAD VVSRRCPAAS LPKTAVQCRH KMEKLRKRYR AELQRARSLP  120
VARFVSSWAH FKHMDAMEKG PGAPKDPESE EENEDMDDED DDELFEGIAP NSRSVYGLYG  180
NGVGHETPAA GKSGGGFRIK IPSAVSIAQP GIDHRKFDRS FDRSFGSGPS SGVNASGSNR  240
FARFGGGAGG GYGARVLRES ESGKVGLGKR ERDPMEEMVG AIRGLGDGFV RMERMKMEMA  300
REMENMRMEM EMKRTEMVLE SQQRIVDAFT RAVTEKPARK KKMAKRMPSP ENS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	1e-70	Trihelix family protein