PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM64659.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GeBP
Protein Properties Length: 276aa    MW: 31326.7 Da    PI: 9.3818
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM64659.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573575.4e-1850142298
      DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddida.fyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 
                 +f+r++ ++Dei+lL+ + + ++k   sp   id    e++ +s+ +k++++ql++K+r++++K++k++       + s++++ d++i+el++kiWg+
  OWM64659.1  50 RFERVFKKKDEIMLLRSFFEATDKSVPSPATKIDPtTLEILGESLGSKFTHTQLSNKLRHMRDKYRKQSLG-----KSSIKTPRDRQIYELCRKIWGK 142
                 799******************99998899999997257999*************************99877.....679*****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MSTPRTARLR PSSRRQSVPY PLPTPSADNN HDGEHHDQAP PSRDGNRKPR FERVFKKKDE  60
IMLLRSFFEA TDKSVPSPAT KIDPTTLEIL GESLGSKFTH TQLSNKLRHM RDKYRKQSLG  120
KSSIKTPRDR QIYELCRKIW GKNEAELMEM EEQEEAPLQQ EEVPSQRLSQ SQSHGESKHK  180
IAAAIKEKGN EEGRADLGKF PMLVEECDKA LEGNGVWRQV LKCLEEGKLR EMNDKLVMLK  240
YEEAGLMAKK AELVQELTRM IVGAMAASCS SPRTAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.19e-09GeBP family protein