PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OWM64640.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 309aa MW: 34774.7 Da PI: 5.9986 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 101.4 | 5.2e-32 | 113 | 169 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 dDgy+WrKYGqK++k+s++prsYY+Ct ++C++kk+ver++edp++++itYeg H h OWM64640.1 113 DDGYKWRKYGQKSIKNSPNPRSYYKCTNPRCSAKKQVERCSEDPDTLIITYEGLHLH 169 8******************************************************99 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 309 aa Download sequence |
MSFGEYSEDD LVRELLHDDS PLFAPLELQG HQSQSVPSDD ETIKRLISTV YSGPTIQDIE 60 NALFFSSQNK HHNEDHSFSQ QPRGAWFGQR GMNRVENKYT LRIKSCGSNG MTDDGYKWRK 120 YGQKSIKNSP NPRSYYKCTN PRCSAKKQVE RCSEDPDTLI ITYEGLHLHF AYPFFLLGPN 180 QPVDPPVKKP KKTSPQTGTD QAPKAHLQVE EAHGPPSPVQ DGPNPTLPEE RPESPAQEEG 240 MGLLEDVVPW MIRCPRRTSN STFASSHRPS VSPPTSPSSV SWSPDYPTDQ FYDIGINMAL 300 NELIEKSII |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G43290.1 | 2e-48 | WRKY family protein |