PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM64584.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WRKY

Protein Properties

Length: 447aa MW: 49256.4 Da PI: 9.5736

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM64584.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.5	5.6e-33	183	239	3	60
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers d+++ ei+Y+geHnh+k OWM64584.1 183 DGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSL-DGQIAEIVYKGEHNHSK 239 9*************************************.*************85 PP
2	WRKY	103.7	1e-32	363	421	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYGqK+vkg+++prsYY+Cts +C+v+k ver+++dpk++++tYeg+Hnhe OWM64584.1 363 LDDGFRWRKYGQKVVKGNPYPRSYYKCTSIECSVRKYVERAQDDPKAFITTYEGKHNHE 421 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MENKEADRIV VSKPVASRPS SSFIQPFSDL LAGAIRGSLP CVGPETGTGP IKPKTVKFKP 60 TLTHGPPPSV SSQGDAVRSD IKPPILHKPL AKAVSKVAMS VLANMGKYEP RHRQEKPSSQ 120 ARIDSVEHQV EKPYSLRTQP GSSFQENLRN LPATASGDCS SSLPVMDSRD LPAPASVDRP 180 SYDGYNWRKY GQKQVKGSEY PRSYYKCTHP NCPVKKKVER SLDGQIAEIV YKGEHNHSKP 240 QPPKRGLGTG QDIGNPLIGS RVIERNEGSE GGVEATTDIN LKRSLTCDRV VDRDRGTAGL 300 NLDDSCSPSE EYVDGAMGMN IDPDEPRSKR RKTKKQLNGV EINGESPQEP RVPLQGSVDP 360 EILDDGFRWR KYGQKVVKGN PYPRSYYKCT SIECSVRKYV ERAQDDPKAF ITTYEGKHNH 420 EMPIRSVNVP SSESTPRATA NKERAPA

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MENKEADRIV VSKPVASRPS SSFIQPFSDL LAGAIRGSLP CVGPETGTGP IKPKTVKFKP  60
TLTHGPPPSV SSQGDAVRSD IKPPILHKPL AKAVSKVAMS VLANMGKYEP RHRQEKPSSQ  120
ARIDSVEHQV EKPYSLRTQP GSSFQENLRN LPATASGDCS SSLPVMDSRD LPAPASVDRP  180
SYDGYNWRKY GQKQVKGSEY PRSYYKCTHP NCPVKKKVER SLDGQIAEIV YKGEHNHSKP  240
QPPKRGLGTG QDIGNPLIGS RVIERNEGSE GGVEATTDIN LKRSLTCDRV VDRDRGTAGL  300
NLDDSCSPSE EYVDGAMGMN IDPDEPRSKR RKTKKQLNGV EINGESPQEP RVPLQGSVDP  360
EILDDGFRWR KYGQKVVKGN PYPRSYYKCT SIECSVRKYV ERAQDDPKAF ITTYEGKHNH  420
EMPIRSVNVP SSESTPRATA NKERAPA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37260.1	5e-88	WRKY family protein