PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM64486.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 398aa MW: 44871.4 Da PI: 4.5061

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM64486.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.4	6.1e-14	116	168	2	55
HHHHHHHHHHHHHHHHHH...HHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsa...feeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h+e E+rRR++iN++ f+ Lr+l+P++ ++K +Ka+ L +++eYI+ Lq OWM64486.1 116 RSKHSETEQRRRSKINERremFQVLRDLIPQN----DQKRDKASFLLEVIEYIHFLQ 168 899***********75555******9....9****************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MQPYRRQELE PGIPWLFHLS AASLLLSSIL QLDEWLEQPA EGLGWDFVRV ELLVMVRPPR 60 SSFPEEDLEE EEEEEEEEEE EEPYYGEDFT PCHDSSSRKG EAGKVDGKKG STNTPRSKHS 120 ETEQRRRSKI NERREMFQVL RDLIPQNDQK RDKASFLLEV IEYIHFLQEK LQMYEGPYHG 180 YNQERTKLTP WRNNSGNVDS HVEAAQVMRN GTNHENNVMV NPGMRTATQN SLEPDIENAT 240 VPMQMQSNMF ASVERGGVSG LALQPLPSIG NMTSHPQPQL WPSTPFAAER VMPNNSLNED 300 EQLHIENGPE SLSSAYSQGL LNMLTQALQN SGMDLSQASI SVQIDVGKRA DVAAAGTSTG 360 SQDHENHQPG SEAAVHGGDR SNGEEWDDQP HKKLRTQS

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MQPYRRQELE PGIPWLFHLS AASLLLSSIL QLDEWLEQPA EGLGWDFVRV ELLVMVRPPR  60
SSFPEEDLEE EEEEEEEEEE EEPYYGEDFT PCHDSSSRKG EAGKVDGKKG STNTPRSKHS  120
ETEQRRRSKI NERREMFQVL RDLIPQNDQK RDKASFLLEV IEYIHFLQEK LQMYEGPYHG  180
YNQERTKLTP WRNNSGNVDS HVEAAQVMRN GTNHENNVMV NPGMRTATQN SLEPDIENAT  240
VPMQMQSNMF ASVERGGVSG LALQPLPSIG NMTSHPQPQL WPSTPFAAER VMPNNSLNED  300
EQLHIENGPE SLSSAYSQGL LNMLTQALQN SGMDLSQASI SVQIDVGKRA DVAAAGTSTG  360
SQDHENHQPG SEAAVHGGDR SNGEEWDDQP HKKLRTQS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69010.1	6e-55	bHLH family protein