PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM64180.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 306aa    MW: 33424.7 Da    PI: 7.6917
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM64180.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.73.8e-204696256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                ++ GVr+++ +grWvAeI+d s   +r r +lg+++t+eeAa+a+++a+++l+ge
  OWM64180.1 46 RFVGVRQRP-SGRWVAEIKDSS---QRVRLWLGTYDTPEEAARAYDEAARALRGE 96
                589******.7*********43...36**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MAGSETTKNK NNIDGENNCN NNHNVSATTA GTVSSMALPS KPACRRFVGV RQRPSGRWVA  60
EIKDSSQRVR LWLGTYDTPE EAARAYDEAA RALRGENART NFASISNNYG PCQQPANLSR  120
PVNNSSHGLS FSSLKAKLSK NLQSIMARTT ENKSSKSRVS DHFTFASIFH FKGYHQYQNP  180
PDMRNMDKVV QPSIIVPSHV VDDFADPCCW DSSSLSDCSC EWAGFRHPTG FDSDGSSDIG  240
DVRIGDHNGF TDCQIAGWMD SPEWSSCSSS GEGSRSKRFK VSSSVVIPPT FSACGSPYNN  300
NIGPEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-16ERF family protein